KEGG Orthology (KO) - Pseudomonas brassicacearum subsp. brassicacearum NFM421

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:pba00250]
     00260 Glycine, serine and threonine metabolism [PATH:pba00260]
     00270 Cysteine and methionine metabolism [PATH:pba00270]
     00280 Valine, leucine and isoleucine degradation [PATH:pba00280]
     00290 Valine, leucine and isoleucine biosynthesis [PATH:pba00290]
     00300 Lysine biosynthesis [PATH:pba00300]
       PSEBR_a996 homoserine dehydrogenase
       PSEBR_a3034 putative homoserine dehydrogenase
       PSEBR_a4997 putative homoserine dehydrogenase
       PSEBR_a4309 Aspartate kinase
       PSEBR_a3864 Aspartate-semialdehyde dehydrogenase
       PSEBR_a5638 putative aspartate-semialdehyde dehydrogenase
       PSEBR_a1347 Dihydrodipicolinate synthase
       PSEBR_cmegm71 putative dihydrodipicolinate synthase
       PSEBR_a3611 Dihydrodipicolinate synthase
       PSEBR_a766 Dihydrodipicolinate reductase
       PSEBR_a1056 putative 2; lysine biosynthesis-related protein
       PSEBR_a4662 Acetylornithine transaminase
       PSEBR_a1062 putative aminotransferase (Aspartate transaminase)
       PSEBR_a2865 putative aminotransferase
       PSEBR_a1052 Succinyl-diaminopimelate desuccinylase
       PSEBR_a3987 Diaminopimelate epimerase
       PSEBR_a5485 diaminopimelate epimerase
       PSEBR_a3898 Putative epimerase
       PSEBR_a5484 diaminopimelate decarboxylase
       PSEBR_a4180 Putative aminotransferase
       PSEBR_a4626 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       PSEBR_a4625 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
K00928 lysC; aspartate kinase [EC:2.7.2.4]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
     00310 Lysine degradation [PATH:pba00310]
     00220 Arginine biosynthesis [PATH:pba00220]
     00330 Arginine and proline metabolism [PATH:pba00330]
     00340 Histidine metabolism [PATH:pba00340]
     00350 Tyrosine metabolism [PATH:pba00350]
     00360 Phenylalanine metabolism [PATH:pba00360]
     00380 Tryptophan metabolism [PATH:pba00380]
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pba00400]
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
     00510 N-Glycan biosynthesis
     00513 Various types of N-glycan biosynthesis
     00512 Mucin type O-glycan biosynthesis
     00515 Mannose type O-glycan biosynthesis
     00514 Other types of O-glycan biosynthesis
     00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
     00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
     00533 Glycosaminoglycan biosynthesis - keratan sulfate
     00531 Glycosaminoglycan degradation
     00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
     00601 Glycosphingolipid biosynthesis - lacto and neolacto series
     00603 Glycosphingolipid biosynthesis - globo and isoglobo series
     00604 Glycosphingolipid biosynthesis - ganglio series
     00511 Other glycan degradation
     00540 Lipopolysaccharide biosynthesis [PATH:pba00540]
     00542 O-Antigen repeat unit biosynthesis
     00541 O-Antigen nucleotide sugar biosynthesis [PATH:pba00541]
     00550 Peptidoglycan biosynthesis [PATH:pba00550]
       PSEBR_a858 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       PSEBR_a4064 UDP-N-acetylmuramate dehydrogenase (UDP-N-acetylenolpyruvoylglucosamine reductase)
       PSEBR_a4620 UDP-N-acetylmuramate--L-alanine ligase
       PSEBR_a4623 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       PSEBR_a4626 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       PSEBR_a4619 D-alanine--D-alanine ligase B
       PSEBR_a4625 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
       PSEBR_a1069 Di-trans,poly-cis-decaprenylcistransferase (undecaprenyl pyrophosphate synthetase)
       PSEBR_a3107 Undecaprenyl-diphosphatase
       PSEBR_a4624 Phospho-N-acetylmuramoyl-pentapeptide-transferase
       PSEBR_a4621 UDP-N-acetylglucosamine--N-acetylmuramyl-(penta pe ptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase
       PSEBR_a5334 monofunctional biosynthetic peptidoglycan transglycosylase
       PSEBR_a421 Penicillin-binding protein 1A
       PSEBR_a4798 Penicillin-binding protein 1B
       PSEBR_a4964 putative penicillin-binding protein
       PSEBR_a4627 Putative peptidoglycan glycosyltransferase
       PSEBR_a4960 putative cell division-related protein
       PSEBR_a1696 Putative serine-type D-Ala-D-Ala carboxypeptidase
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
     00552 Teichoic acid biosynthesis [PATH:pba00552]
     00571 Lipoarabinomannan (LAM) biosynthesis
     00572 Arabinogalactan biosynthesis - Mycobacterium
     00543 Exopolysaccharide biosynthesis [PATH:pba00543]
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:pba01000]
     01001 Protein kinases [BR:pba01001]
     01009 Protein phosphatases and associated proteins [BR:pba01009]
     01002 Peptidases and inhibitors [BR:pba01002]
     01003 Glycosyltransferases [BR:pba01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:pba01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:pba01011]
       PSEBR_a858 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
       PSEBR_a4064 UDP-N-acetylmuramate dehydrogenase (UDP-N-acetylenolpyruvoylglucosamine reductase)
       PSEBR_a4620 UDP-N-acetylmuramate--L-alanine ligase
       PSEBR_a4623 UDP-N-acetylmuramoylalanine--D-glutamate ligase
       PSEBR_a4626 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
       PSEBR_a4619 D-alanine--D-alanine ligase B
       PSEBR_a5506 alanine racemase
       PSEBR_a4755 Glutamate racemase
       PSEBR_a4956 putative muramoyltetrapeptide carboxypeptidase
       PSEBR_a4624 Phospho-N-acetylmuramoyl-pentapeptide-transferase
       PSEBR_a4621 UDP-N-acetylglucosamine--N-acetylmuramyl-(penta pe ptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase
       PSEBR_a3107 Undecaprenyl-diphosphatase
       PSEBR_a4859 Putative virulence factor, MviN-like protein
       PSEBR_a421 Penicillin-binding protein 1A
       PSEBR_a4798 Penicillin-binding protein 1B
       PSEBR_a4964 putative penicillin-binding protein
       PSEBR_a4627 Putative peptidoglycan glycosyltransferase
       PSEBR_a4960 putative cell division-related protein
       PSEBR_a1696 Putative serine-type D-Ala-D-Ala carboxypeptidase
       PSEBR_a1811 putative serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine carboxypeptidase)
       PSEBR_a5334 monofunctional biosynthetic peptidoglycan transglycosylase
       PSEBR_a1605 Conserved hypothetical protein
       PSEBR_a2969 Conserved hypothetical protein
       PSEBR_a2910 D-alanyl-D-alanine dipeptidase
       PSEBR_a1743 Putative lytic transglycosylase
       PSEBR_a5277 putative hydrolase
       PSEBR_a4962 putative peptidoglycan-related protein
       PSEBR_a4955 putative lipoprotein
       PSEBR_a3287 Membrane-bound lytic murein transglycosylase D
       PSEBR_a5394 putative transglycosylase
       PSEBR_a4550 Membrane-bound lytic murein transglycosylase F
       PSEBR_a4047 putative aminodeoxychorismate lyase
       PSEBR_a823 putative lipoprotein A-like protein
       PSEBR_a4961 conserved hypothetical protein; putative lipoprotein
       PSEBR_a538 N-acetylmuramoyl-L-alanine amidase
       PSEBR_a46 Putative N-acetylmuramoyl-L-alanine amidase
       PSEBR_a786 N-acetyl-anhydromuramyl-L-alanine amidase; Peptidoglycan recognition proteins (PGRPs) superfamily
K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
K01775 alr; alanine racemase [EC:5.1.1.1]
K01776 murI; glutamate racemase [EC:5.1.1.3]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
K03980 murJ; putative peptidoglycan lipid II flippase
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K21470 ycbB; L,D-transpeptidase YcbB
K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
     01004 Lipid biosynthesis proteins [BR:pba01004]
     01008 Polyketide biosynthesis proteins [BR:pba01008]
     01006 Prenyltransferases [BR:pba01006]
     01007 Amino acid related enzymes [BR:pba01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins [BR:pba00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024