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KO |
09100 Metabolism
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09101 Carbohydrate metabolism
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09102 Energy metabolism
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09103 Lipid metabolism
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09104 Nucleotide metabolism
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09105 Amino acid metabolism
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09106 Metabolism of other amino acids
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00410 beta-Alanine metabolism [PATH:plum00410]
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00430 Taurine and hypotaurine metabolism [PATH:plum00430]
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00440 Phosphonate and phosphinate metabolism
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00450 Selenocompound metabolism [PATH:plum00450]
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A4R40_23670 cystathionine gamma-synthase
A4R40_19600 cystathionine beta-lyase
A4R40_18560 aminotransferase
A4R40_21930 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
A4R40_02595 cystathionine beta-lyase
A4R40_13025 cysteine sulfinate desulfinase
A4R40_08095 thioredoxin-disulfide reductase
A4R40_03550 cysN; sulfate adenylyltransferase subunit CysN
A4R40_03545 sulfate adenylyltransferase small subunit
A4R40_12680 selenide,water dikinase SelD
A4R40_24325 L-seryl-tRNA(Sec) selenium transferase
A4R40_21150 hypothetical protein
A4R40_07870 metG; methionine--tRNA ligase
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K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
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00460 Cyanoamino acid metabolism [PATH:plum00460]
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00470 D-Amino acid metabolism [PATH:plum00470]
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00480 Glutathione metabolism [PATH:plum00480]
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09107 Glycan biosynthesis and metabolism
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09108 Metabolism of cofactors and vitamins
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09109 Metabolism of terpenoids and polyketides
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09110 Biosynthesis of other secondary metabolites
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09111 Xenobiotics biodegradation and metabolism
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09112 Not included in regular maps
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09120 Genetic Information Processing
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:plum03000]
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03021 Transcription machinery [BR:plum03021]
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03019 Messenger RNA biogenesis [BR:plum03019]
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03041 Spliceosome
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03011 Ribosome [BR:plum03011]
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03009 Ribosome biogenesis [BR:plum03009]
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03016 Transfer RNA biogenesis [BR:plum03016]
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A4R40_19520 ribonuclease
A4R40_19745 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
A4R40_21350 RNA-splicing ligase RtcB
A4R40_07010 gltX; glutamate--tRNA ligase
A4R40_03430 proline--tRNA ligase
A4R40_02935 ileS; isoleucine--tRNA ligase
A4R40_06485 leuS; leucine--tRNA ligase
A4R40_21150 hypothetical protein
A4R40_07870 metG; methionine--tRNA ligase
A4R40_06590 glutamine--tRNA ligase
A4R40_10495 arginine--tRNA ligase
A4R40_17650 lysS; lysine--tRNA ligase
A4R40_10565 aspartate--tRNA ligase
A4R40_00930 hypothetical protein
A4R40_06175 alanine--tRNA ligase
A4R40_08840 asparagine--tRNA ligase
A4R40_13290 thrS; threonine--tRNA ligase
A4R40_08120 serine--tRNA ligase
A4R40_18930 cysS; cysteine--tRNA ligase
A4R40_22195 valine--tRNA ligase
A4R40_06880 hisS; histidine--tRNA ligase
A4R40_13270 phenylalanine--tRNA ligase subunit alpha
A4R40_13265 pheT; phenylalanine--tRNA ligase subunit beta
A4R40_00975 tyrosine--tRNA ligase
A4R40_12905 tyrosine--tRNA ligase
A4R40_00415 tryptophan--tRNA ligase
A4R40_01185 D-tyrosyl-tRNA(Tyr) deacylase
A4R40_14085 histidine triad nucleotide-binding protein
A4R40_05780 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB
A4R40_03435 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
A4R40_15845 truA; tRNA pseudouridine(38,39,40) synthase TruA
A4R40_22410 truB; tRNA pseudouridine(55) synthase TruB
A4R40_03575 truD; tRNA pseudouridine(13) synthase TruD
A4R40_15510 nitrogen fixation protein NifS
A4R40_16400 cysteine desulfurase IscS
A4R40_04575 cysteine desulfurase IscS
A4R40_23185 hypothetical protein
A4R40_23305 L-threonylcarbamoyladenylate synthase TsaC
A4R40_22700 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
A4R40_24365 trmE; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE
A4R40_00225 tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG
A4R40_12680 selenide,water dikinase SelD
A4R40_22580 3'(2'),5'-bisphosphate nucleotidase CysQ
A4R40_24380 rnpA; ribonuclease P protein component
A4R40_12940 ribonuclease T
A4R40_24210 rph; ribonuclease PH
A4R40_11890 exoribonuclease II
A4R40_10705 ribonuclease D
A4R40_02750 energy-dependent translational throttle protein EttA
A4R40_19530 hypothetical protein
A4R40_01425 glycine--tRNA ligase subunit alpha
A4R40_01430 glyS; glycine--tRNA ligase subunit beta
A4R40_04370 tRNA glutamyl-Q synthetase
A4R40_19040 aminoacyl-tRNA deacylase
A4R40_07910 hypothetical protein
A4R40_16565 tRNA adenosine(34) deaminase TadA
A4R40_21625 tRNA dihydrouridine synthase DusA
A4R40_20290 tRNA dihydrouridine synthase DusB
A4R40_07685 tRNA dihydrouridine synthase DusC
A4R40_06530 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
A4R40_10545 tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP
A4R40_10540 tRNA 5-methoxyuridine(34) synthase CmoB
A4R40_08275 S-adenosyl-L-methionine-dependent methyltransferase
A4R40_23575 tRNA (uridine(54)-C5)-methyltransferase TrmA
A4R40_06240 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD
A4R40_06340 methyltransferase
A4R40_16410 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ
A4R40_24035 tRNA (cytosine(34)-2'-O)-methyltransferase TrmL
A4R40_16695 tRNA (adenosine(37)-N6)-methyltransferase TrmM
A4R40_03290 tRNA pseudouridine(65) synthase TruC
A4R40_03035 bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA
A4R40_13980 mnmA; tRNA 2-thiouridine(34) synthase MnmA
A4R40_12805 tRNA 2-thiocytidine(32) synthetase TtcA
A4R40_20395 tRNA 2-thiouridine(34) synthase TusA
A4R40_02095 tRNA 2-thiouridine(34) synthase TusB
A4R40_02090 tRNA 2-thiouridine(34) synthase TusC
A4R40_02085 tRNA 2-thiouridine(34) synthase TusD
A4R40_08975 sulfur relay protein TusE
A4R40_16390 iscA; iron-sulfur cluster assembly protein IscA
A4R40_17690 ygfZ; tRNA-modifying protein YgfZ
A4R40_03615 tRNA hydroxylase
A4R40_15905 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmD/FAD-dependent cmnm(5)s(2)U34 oxidoreductase MnmC
A4R40_19415 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
A4R40_19210 7-cyano-7-deazaguanine synthase QueC
A4R40_13930 queuosine biosynthesis protein
A4R40_03510 6-carboxytetrahydropterin synthase QueD
A4R40_03505 7-carboxy-7-deazaguanine synthase QueE
A4R40_03275 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
A4R40_22720 tRNA epoxyqueuosine(34) reductase QueG
A4R40_02540 hypothetical protein
A4R40_19410 tgt; tRNA guanosine(34) transglycosylase Tgt
A4R40_19315 tRNA 4-thiouridine(8) synthase ThiI
A4R40_03415 tilS; tRNA lysidine(34) synthetase TilS
A4R40_13575 tRNA cytosine(34) acetyltransferase TmcA
A4R40_10690 tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB
A4R40_19765 tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD
A4R40_03210 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
A4R40_22665 exoribonuclease R
A4R40_22400 polyribonucleotide nucleotidyltransferase
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K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K01147 rnb; exoribonuclease II [EC:3.1.13.1]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K06020 ettA; energy-dependent translational throttle protein EttA
K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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03012 Translation factors [BR:plum03012]
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03110 Chaperones and folding catalysts [BR:plum03110]
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04131 Membrane trafficking [BR:plum04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:plum03051]
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03032 DNA replication proteins [BR:plum03032]
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03036 Chromosome and associated proteins [BR:plum03036]
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03400 DNA repair and recombination proteins [BR:plum03400]
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03029 Mitochondrial biogenesis [BR:plum03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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