KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cdm00010 cdm01200 cdm01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cdm00010 cdm01200 cdm01230 cdm01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cdm00010 cdm00020 cdm01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cdm00010 cdm00020 cdm00620 cdm00785 cdm01200 cdm01210 cdm01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cdm00020 cdm01200 cdm01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cdm00020 cdm01200 cdm01210 cdm01230 cdm01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cdm00020 cdm01200 cdm01210 cdm01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cdm00030 cdm01200 cdm01100 cdm01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cdm00030 cdm01200 cdm01100 cdm01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cdm00030 cdm01200 cdm01230 cdm01100 cdm01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cdm00030 cdm00230 cdm01200 cdm01230 cdm01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cdm00030 cdm01200 cdm01100 cdm01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cdm00040 cdm00030 cdm01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cdm00040 cdm00030 cdm01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cdm00052 cdm01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cdm00052 cdm01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cdm00500 cdm01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:cdm00500 cdm01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:cdm00500 cdm01100 cdm01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cdm00520 cdm01250 cdm01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cdm00520 cdm00052 cdm01250 cdm01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cdm00520 cdm01250 cdm01100]
M00012 Glyoxylate cycle [PATH:cdm00630 cdm01200 cdm01100 cdm01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: cdm00730 cdm01240 cdm01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: cdm00730 cdm01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: cdm00740 cdm01240 cdm01100 cdm01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: cdm00750 cdm01240 cdm01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: cdm00760 cdm01240 cdm01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: cdm00770 cdm01240 cdm01100 cdm01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: cdm00770 cdm01240 cdm01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: cdm00780 cdm01240 cdm01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: cdm00780 cdm01240 cdm01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: cdm00785 cdm01240 cdm01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: cdm00790 cdm00670 cdm01240 cdm01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: cdm00790 cdm01240 cdm01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: cdm00860 cdm01240 cdm01100 cdm01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: cdm00860 cdm01240 cdm01100 cdm01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: cdm00130 cdm01240 cdm01100 cdm01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: cdm00130 cdm01240 cdm01100 cdm01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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