KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cpot00010 cpot01200 cpot01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cpot00010 cpot01200 cpot01230 cpot01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cpot00010 cpot00020 cpot01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cpot00010 cpot00020 cpot00620 cpot00785 cpot01200 cpot01210 cpot01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cpot00020 cpot01200 cpot01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cpot00020 cpot01200 cpot01210 cpot01230 cpot01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cpot00020 cpot01200 cpot01210 cpot01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cpot00030 cpot01200 cpot01100 cpot01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cpot00030 cpot01200 cpot01100 cpot01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cpot00030 cpot01200 cpot01230 cpot01100 cpot01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cpot00030 cpot00230 cpot01200 cpot01230 cpot01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cpot00030 cpot01200 cpot01100 cpot01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cpot00040 cpot00030 cpot01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cpot00040 cpot00030 cpot01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cpot00052 cpot01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cpot00053 cpot01100 cpot01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cpot00500 cpot01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:cpot00500 cpot01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cpot00520 cpot01250 cpot01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cpot00520 cpot00052 cpot01250 cpot01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cpot00520 cpot01250 cpot01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cpot00520 cpot01100]
M00012 Glyoxylate cycle [PATH:cpot00630 cpot01200 cpot01100 cpot01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: cpot00730 cpot01240 cpot01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: cpot00730 cpot01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: cpot00740 cpot01240 cpot01100 cpot01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: cpot00750 cpot01240 cpot01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: cpot00760 cpot01240 cpot01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: cpot00770 cpot01240 cpot01100 cpot01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: cpot00770 cpot01240 cpot01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: cpot00780 cpot01240 cpot01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: cpot00780 cpot01240 cpot01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: cpot00785 cpot01240 cpot01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: cpot00790 cpot00670 cpot01240 cpot01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: cpot00790 cpot01240 cpot01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: cpot00860 cpot01240 cpot01100 cpot01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: cpot00860 cpot01240 cpot01100 cpot01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: cpot00860 cpot01240 cpot01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: cpot00860 cpot01240 cpot01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: cpot00130 cpot01240 cpot01100 cpot01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: cpot00130 cpot01240 cpot01100 cpot01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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