KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: kpo00010 kpo01200 kpo01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: kpo00010 kpo01200 kpo01230 kpo01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: kpo00010 kpo00020 kpo01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: kpo00010 kpo00020 kpo00620 kpo00785 kpo01200 kpo01210 kpo01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: kpo00020 kpo01200 kpo01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: kpo00020 kpo01200 kpo01210 kpo01230 kpo01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: kpo00020 kpo01200 kpo01210 kpo01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: kpo00030 kpo01200 kpo01100 kpo01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: kpo00030 kpo01200 kpo01100 kpo01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: kpo00030 kpo01200 kpo01230 kpo01100 kpo01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: kpo00030 kpo00230 kpo01200 kpo01230 kpo01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: kpo00030 kpo01200 kpo01100 kpo01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kpo00040 kpo00030 kpo01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kpo00040 kpo00030 kpo01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:kpo00052 kpo01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:kpo00052 kpo01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:kpo00053 kpo01100 kpo01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:kpo00500 kpo01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:kpo00500 kpo01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:kpo00520 kpo01250 kpo01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:kpo00520 kpo00052 kpo01250 kpo01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:kpo00520 kpo01250 kpo01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:kpo00520 kpo01100]
M00012 Glyoxylate cycle [PATH:kpo00630 kpo01200 kpo01100 kpo01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: kpo00730 kpo01240 kpo01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: kpo00730 kpo01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: kpo00740 kpo01240 kpo01100 kpo01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: kpo00750 kpo01240 kpo01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: kpo00760 kpo01240 kpo01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: kpo00770 kpo01240 kpo01100 kpo01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: kpo00770 kpo01240 kpo01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: kpo00780 kpo01240 kpo01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: kpo00780 kpo01240 kpo01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: kpo00785 kpo01240 kpo01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: kpo00790 kpo00670 kpo01240 kpo01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: kpo00790 kpo01240 kpo01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: kpo00860 kpo01240 kpo01100 kpo01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: kpo00860 kpo01240 kpo01100 kpo01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: kpo00860 kpo01240 kpo01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: kpo00860 kpo01240 kpo01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: kpo00130 kpo01240 kpo01100 kpo01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: kpo00130 kpo01240 kpo01100 kpo01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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