KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: seni00010 seni01200 seni01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: seni00010 seni01200 seni01230 seni01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: seni00010 seni00020 seni01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: seni00010 seni00020 seni00620 seni00785 seni01200 seni01210 seni01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: seni00020 seni01200 seni01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: seni00020 seni01200 seni01210 seni01230 seni01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: seni00020 seni01200 seni01210 seni01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: seni00030 seni01200 seni01100 seni01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: seni00030 seni01200 seni01100 seni01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: seni00030 seni01200 seni01230 seni01100 seni01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: seni00030 seni01200 seni01230 seni01100 seni01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: seni00030 seni00230 seni01200 seni01230 seni01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: seni00030 seni01200 seni01100 seni01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:seni00040 seni00030 seni01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:seni00052 seni01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:seni00052 seni01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:seni00053 seni01100 seni01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:seni00500 seni01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:seni00500 seni01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:seni00500 seni01100 seni01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:seni00520 seni01250 seni01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:seni00520 seni00052 seni01250 seni01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:seni00520 seni01250 seni01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:seni00520 seni01100]
M00012 Glyoxylate cycle [PATH:seni00630 seni01200 seni01100 seni01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: seni00730 seni01240 seni01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: seni00730 seni01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: seni00740 seni01240 seni01100 seni01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: seni00750 seni01240 seni01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: seni00760 seni01240 seni01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: seni00770 seni01240 seni01100 seni01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: seni00770 seni01240 seni01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: seni00780 seni01240 seni01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: seni00780 seni01240 seni01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: seni00785 seni01240 seni01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: seni00790 seni00670 seni01240 seni01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: seni00790 seni01240 seni01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: seni00860 seni01240 seni01100 seni01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: seni00860 seni01240 seni01100 seni01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: seni00860 seni01240 seni01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: seni00130 seni01240 seni01100 seni01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: seni00130 seni01240 seni01100 seni01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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