| T number | T05858 |
| Org_code | spyg |
| Name | Sphingobium sp. YG1 |
| Annotation | yes |
| Taxonomy | TAX: 2082188 |
| Lineage | Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_003609795.1 Complete Genome)
BioProject: 436102 |
| Comment | Lignin model dimer-metabolizing bacterium.
Isolated from sediment in Kagoshima, Japan, at a depth of 102 m.
|
| Chromosome | 1; Circular |
| Sequence | GB: AP018518 |
| Length | 3435856 |
| Chromosome | 2; Circular |
| Sequence | GB: AP018519 |
| Length | 1847201 |
| Plasmid | pYGP1; Circular |
| Sequence | GB: AP018520 |
| Length | 214196 |
| Plasmid | pYGP2; Circular |
| Sequence | GB: AP018521 |
| Length | 66642 |
| Statistics | Number of nucleotides: 5563895
Number of protein genes: 4963
Number of RNA genes: 73
|
| Created | 2019 |
| Reference | PMID: 29700143 |
| Authors | Ohta Y, Shimane Y, Nishi S, Ichikawa J, Kurosawa K, Tsubouchi T, Ishii S |
| Title | Complete Genome Sequence of Sphingobium sp. Strain YG1, a Lignin Model Dimer-Metabolizing Bacterium Isolated from Sediment in Kagoshima Bay, Japan. |
| Journal | Genome Announc 6:e00267-18 (2018)
DOI: 10.1128/genomeA.00267-18 |
Sphingobium sp. YG1