| T number | T06196 |
| Org_code | ebv |
| Name | Empedobacter brevis SE1-3 |
| Annotation | yes |
| Taxonomy | TAX: 247 |
| Lineage | Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Empedobacter |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_008705155.1 Complete Genome)
BioProject: 563978 |
| Comment | Confers resistance to tigecycline.
Isolated from a shrimp sample in Yangzhou, China, in June 2019.
|
| Chromosome | Circular |
| Sequence | GB: CP043634 |
| Length | 3591742 |
| Plasmid | pSE1-3-9kb; Circular |
| Sequence | GB: CP043635 |
| Length | 9780 |
| Plasmid | pSE1-3-20kb; Circular |
| Sequence | GB: CP043636 |
| Length | 20734 |
| Plasmid | pSE1-3-14kb; Circular |
| Sequence | GB: CP043637 |
| Length | 14090 |
| Statistics | Number of nucleotides: 3636346
Number of protein genes: 3290
Number of RNA genes: 107
|
| Created | 2019 |
| Reference | PMID: 31570401 |
| Authors | Li R, Liu Z, Peng K, Liu Y, Xiao X, Wang Z |
| Title | Co-occurrence of two tet(X) variants in an Empedobacter brevis of shrimp origin. |
| Journal | Antimicrob Agents Chemother AAC.01636-19 (2019)
DOI: 10.1128/AAC.01636-19 |
Empedobacter brevis