T number | T06684 |
Org_code | sami |
Name | Sphingobium amiense DSM 16289 |
Category | Type strain |
Annotation | yes |
Taxonomy | TAX: 135719 |
Lineage | Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_003967075.1 Complete Genome) BioProject: 496619 |
Comment | Branched nonylphenol (BNP)-degrading bacterium.
|
Chromosome | Circular |
Sequence | GB: AP018664 |
Length | 4221764 |
Plasmid | pSAMIE_2; Circular |
Sequence | GB: AP018665 |
Length | 212396 |
Plasmid | pSAMIE_3; Circular |
Sequence | GB: AP018666 |
Length | 212121 |
Plasmid | pSAMIE_4; Circular |
Sequence | GB: AP018667 |
Length | 55670 |
Plasmid | pSAMIE_5; Circular |
Sequence | GB: AP018668 |
Length | 39623 |
Plasmid | pSAMIE_6; Circular |
Sequence | GB: AP018669 |
Length | 22371 |
Plasmid | pSAMIE_7; Circular |
Sequence | GB: AP018670 |
Length | 9977 |
Statistics | Number of nucleotides: 4773922 Number of protein genes: 4089 Number of RNA genes: 60
|
Created | 2020 |
Reference | PMID: 30518740 |
Authors | Ootsuka M, Nishizawa T, Hasegawa M, Kurusu Y, Ohta H |
Title | Comparative Analysis of the Genetic Basis of Branched Nonylphenol Degradation by Sphingobium amiense DSM 16289(T) and Sphingobium cloacae JCM 10874(T). |
Journal | Microbes Environ 33:450-454 (2018) DOI: 10.1264/jsme2.ME18077 |