ID or terms query

Helicobacter.1552 (63 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpy.1118 hpy:HP1248 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 heo.1236 heo:C694_06450 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpj.1165 hpj:jhp_1169 vacB; RIBONUCLEASE II FAMILY PROTEIN; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpa.1189 hpa:HPAG1_1191 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hps.1224 hps:HPSH_06465 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hhp.1183 hhp:HPSH112_06230 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hhq.1178 hhq:HPSH169_06210 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hhr.1177 hhr:HPSH417_06130 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpg.219 hpg:HPG27_1193 3'-5'exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpp.1203 hpp:HPP12_1214 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpb.1045 hpb:HELPY_1224 rnr; Ribonuclease R (RNase R) (Protein VacB); K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpl.867 hpl:HPB8_232 rnr; Ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpc.1170 hpc:HPPC_06130 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hca.1162 hca:HPPC18_06230 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpm.1195 hpm:HPSJM_06240 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpe.1220 hpe:HPELS_06490 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpo.1341 hpo:HMPREF4655_21440 RNB-like protein; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpi.1237 hpi:hp908_1247 3'-to-5'exo ribonuclease RNase R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpq.1241 hpq:hp2017_1206 3'-to-5' exoribonuclease RNase R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpw.1258 hpw:hp2018_1211 3'-to-5' exoribonuclease RNase R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpu.1225 hpu:HPCU_06380 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hef.1176 hef:HPF16_1182 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpf.154 hpf:HPF30_0149 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 heq.1175 heq:HPF32_1178 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hex.1204 hex:HPF57_1207 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpt.1156 hpt:HPSAT_06020 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpz.1091 hpz:HPKB_1183 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpv.1201 hpv:HPV225_1282 Ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpx.1261 hpx:HMPREF0462_1264 RNB-like protein; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hen.1187 hen:HPSNT_06270 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hph.1175 hph:HPLT_06265 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 heg.1211 heg:HPGAM_06460 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpn.1251 hpn:HPIN_06595 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hep.1163 hep:HPPN120_06135 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 heu.1233 heu:HPPN135_06415 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.351 hes.1163 hes:HPSA_06135 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.352 hpys.1311 hpys:HPSA20_1351 RNB domain protein; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hcn.1138 hcn:HPB14_05935 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpd.1110 hpd:KHP_1144 rnr; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hey.1130 hey:MWE_1454 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 her.1237 her:C695_06460 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hei.1235 hei:C730_06460 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpya.1148 hpya:HPAKL117_05920 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyk.1274 hpyk:HPAKL86_06635 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyo.1200 hpyo:HPOK113_1203 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyl.1139 hpyl:HPOK310_1141 vacB; 3'-5' exoribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyb.1184 hpyb:HPOKI102_06625 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyc.1182 hpyc:HPOKI112_06640 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyd.1377 hpyd:HPOKI128_07675 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpye.1124 hpye:HPOKI154_06310 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyg.1118 hpyg:HPOKI673_06280 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyh.1126 hpyh:HPOKI828_06315 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyj.1191 hpyj:HPOKI898_06635 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyr.226 hpyr:K747_04780 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyi.376 hpyi:K750_02200 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpyu.232 hpyu:K751_01370 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hpym.1260 hpym:K749_07540 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hem.1038 hem:K748_05950 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 heb.334 heb:U063_0358 3'-to-5' exoribonuclease RNase R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_pylori.350 hez.335 hez:U064_0359 3'-to-5' exoribonuclease RNase R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552   hac.252 hac:Hac_0245 vacB; ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_cetorum.996 hce.444 hce:HCW_02200 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]
OC.141027 Bacteria.286953 Proteobacteria.293073 Epsilonproteobacteria.397 Helicobacter.1552 Helicobacter_cetorum.1726 hcm.110 hcm:HCD_00350 ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-]

( plain text of OC.141027 )

Refinement of cluster

OC depth

KOs in cluster

    K12573 (63) ribonuclease R [EC:3.1.-.-]

> Pathway search
> BRITE search

Organism selection


Distribution of taxonomic categories

sequence organism Helicobacter KO

Neighbor clusters

OC.140993 (1) OC.140994 (1639) OC.140995 (1) OC.140996-141009 OC.141010 (10) OC.141011-141012 OC.141013 (1) OC.141014-141021 OC.141022 (2) OC.141023-141024 OC.141025 (6) OC.141026 (17) OC.141027 (154) OC.141028 (17) OC.140948-140992 OC.141029-141044