Gossypium hirsutum

Gossypium hirsutum

Scientific Name	Gossypium hirsutum [TAX:3635]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
DBLINKS	KEGG GENOME: T04793

Known viruses (28)

Scientific Name	Chickpea chlorotic dwarf virus D [TAX:1400200]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus; Chickpea chlorotic dwarf virus
GenBank	KF176552 Chickpea chlorotic dwarf virus D isolate 4K1, complete genome.
Evidence	Literature
Reference	PMID: 24212888
Authors	Manzoor MT, Ilyas M, Shafiq M, Haider MS, Shahid AA, Briddon RW
Title	A distinct strain of chickpea chlorotic dwarf virus (genus Mastrevirus, family Geminiviridae) identified in cotton plants affected by leaf curl disease.
Journal	Arch Virol. 2014 May;159(5):1217-21.
DBLINKS	ViralZone: genus, family

Scientific Name	Cotton chlorotic spot virus [TAX:1396815]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_038794 Cotton chlorotic spot virus isolate Brazil:CampinaGrandeB012:2009 segment DNA-A, complete sequence. NC_038795 Cotton chlorotic spot virus isolate Brazil:CampinaGrandeB012:2009 segment DNA-B, complete sequence.
Evidence	Literature
Reference	PMID: 24201190
Authors	de Almeida MM, Jain S, Barroso PA, Hoffmann LV, de Lucena MG, Resende Rde O, Inoue-Nagata AK
Title	Complete sequence of a new bipartite begomovirus infecting cotton plants in Brazil.
Journal	Genome Announc. 2013 Nov 7;1(6).
DBLINKS	KEGG BRITE: NC_038794 NC_038795 ICTV: 202303223 ViralZone: genus, family

Scientific Name	Cotton leaf crumple virus [TAX:77647]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004580 Cotton leaf crumple virus DNA A, complete sequence. NC_004581 Cotton leaf crumple geminivirus DNA B, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_004580 NC_004581 ICTV: 202303224 ViralZone: genus, family

Scientific Name	Cotton leaf curl Alabad virus [TAX:222456]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004582 Cotton leaf curl Alabad virus, complete genome.
Evidence	Literature
Reference	PMID: 9568988
Authors	Zhou X, Liu Y, Robinson DJ, Harrison BD
Title	Four DNA-A variants among Pakistani isolates of cotton leaf curl virus and their affinities to DNA-A of geminivirus isolates from okra.
Journal	J Gen Virol. 1998 Apr;79 ( Pt 4):915-23.
DBLINKS	KEGG BRITE: NC_004582 ICTV: 202303225 ViralZone: genus, family

Scientific Name	Cotton leaf curl alphasatellite [TAX:1428341]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite; Gossypium darwinii symptomless alphasatellite
GenBank	KM070823 Cotton leaf curl virus associated alphasatellite isolate IARI-45, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	Three variants of cotton leaf curl begomoviruses with their satellite molecules are associated with cotton leaf curl disease aggravation in New Delhi, S Godara, SMP Khurana, KK Biswas - Journal of plant biochemistry and …, 2017 - Springer

Scientific Name	Cotton leaf curl Bangalore betasatellite [TAX:307111]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_007219 Cotton leaf curl Bangalore virus-associated DNA beta, complete genome. NC_076167 Cotton leaf curl Bangalore betasatellite DNA, segment DNA beta, complete sequence, isolate: Jabalpur_E. NC_076223 Cotton leaf curl Bangalore betasatellite strain CH50, complete sequence.
DBLINKS	KEGG BRITE: NC_007219 NC_076167 NC_076223 ICTV: 202309190, 202309193, 202309192

Scientific Name	Cotton leaf curl betasatellite [TAX:134386]
Lineage	Viruses; Tolecusatellitidae; Betasatellite
RefSeq	NC_003200 Cotton leaf curl virus-associated DNA beta, complete genome. NC_017829 Cotton leaf curl virus betasatellite, complete genome. NC_076960 Cotton leaf curl betasatellite complete sequence, isolate IS-6. NC_076961 Cotton leaf curl virus betasatellite complete sequence, isolate Kashmir 1.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 11437658
Authors	Briddon RW, Mansoor S, Bedford ID, Pinner MS, Saunders K, Stanley J, Zafar Y, Malik KA, Markham PG
Title	Identification of dna components required for induction of cotton leaf curl disease.
Journal	Virology. 2001 Jul 5;285(2):234-43.
Comment	Vector: Bemisia tabaci
DBLINKS	KEGG BRITE: NC_003200 NC_017829 NC_076960 NC_076961 ICTV: 202309195, 202309196

Scientific Name	Cotton leaf curl Burewala alphasatellite [TAX:713091]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites
RefSeq	NC_013803 Cotton leaf curl Burewala alphasatellite, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_013803

Scientific Name	Cotton leaf curl Burewala betasatellite [TAX:713092]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_013802 Cotton leaf curl Burewala betasatellite, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_013802

Scientific Name	Cotton leaf curl Burewala virus [TAX:620894]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; unclassified Begomovirus
RefSeq	NC_012137 Cotton leaf curl Burewala virus - [India:Vehari:2004], complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_012137 ICTV: 202303228 ViralZone: genus, family

Scientific Name	Cotton leaf curl Burewala virus - [India:Vehari:2006] [TAX:418448]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Cotton leaf curl Kokhran virus
GenBank	AM421522 Cotton leaf curl Burewala virus - [India:Vehari:2006] complete genome, clone LA2.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Cotton leaf curl Gezira alphasatellite [TAX:679536]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite
RefSeq	NC_013593 Cotton leaf curl Gezira alphasatellite, complete genome. NC_075137 Cotton leaf curl Gezira alphasatellite complete sequence, isolate KSA27 DNA2.
DBLINKS	KEGG BRITE: NC_013593 NC_075137 ICTV: 202305664

Scientific Name	Cotton leaf curl Gezira betasatellite [TAX:304222]
Lineage	Viruses; Tolecusatellitidae; Betasatellite
RefSeq	NC_006935 Cotton leaf curl Gezira virus-associated DNA beta isolate CLC55-C, complete sequence. NC_074988 Cotton leaf curl Gezira virus satellite DNA beta isolate Datura 1 segment satellite, complete sequence. NC_076295 Cotton leaf curl Gezira betasatellite isolate Burkina Faso/Kaya/Sida28BB/2014, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_006935 NC_074988 NC_076295 ICTV: 202309194, 202305132

Scientific Name	Cotton leaf curl Gezira virus-[Cotton] [TAX:222460]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Cotton leaf curl Gezira virus
RefSeq	NC_038444 Cotton leaf curl Gezira virus-[Cotton] A component, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038444 ICTV: 202303227 ViralZone: genus, family

Scientific Name	Cotton leaf curl Kokhran virus [TAX:222464]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004583 Cotton leaf curl Kokhran virus, complete genome.
Evidence	Literature
Reference	PMID: 9568988
Authors	Zhou X, Liu Y, Robinson DJ, Harrison BD
Title	Four DNA-A variants among Pakistani isolates of cotton leaf curl virus and their affinities to DNA-A of geminivirus isolates from okra.
Journal	J Gen Virol. 1998 Apr;79 ( Pt 4):915-23.
DBLINKS	KEGG BRITE: NC_004583 ICTV: 202303228 ViralZone: genus, family

Scientific Name	Cotton leaf curl Kokhran virus-[Faisalabad1] [TAX:222466]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Cotton leaf curl Kokhran virus
GenBank	AJ496286 Cotton leaf curl Kokhran virus-[Faisalabad1] complete genome, isolate Faisalabad x2f.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Cotton leaf curl Lucknow alphasatellite [TAX:2169841]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite
RefSeq	NC_015327 Cotton leaf curl virus associated DNA 1 isolate Lucknow, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_015327 ICTV: 202305684

Scientific Name	Cotton leaf curl Multan alphasatellite [TAX:1048668]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite
RefSeq	NC_018082 Cotton leaf curl Multan alphasatellite, complete genome.
DBLINKS	KEGG BRITE: NC_018082

Scientific Name	Cotton leaf curl Multan betasatellite [TAX:306025]
Lineage	Viruses; Tolecusatellitidae; Betasatellite
RefSeq	NC_009535 Cotton leaf curl Multan virus satellite DNA beta, complete genome. NC_075097 Cotton leaf curl Multan betasatellite c1 gene. NC_076136 Cotton leaf curl Multan betasatellite isolate ToLCBV-Ban5-AJ810354, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_009535 NC_075097 NC_076136 ICTV: 202309191, 202305133

Scientific Name	Cotton leaf curl Multan virus [TAX:223252]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003199 Cotton leaf curl Multan virus segment A, complete sequence. NC_004607 Cotton leaf curl Multan virus, complete genome.
Evidence	Literature
Reference	Cotton leaf curl Multan virus newly reported to be associated with cotton leaf curl disease in China Cotton leaf curl Multan virus newly reported to be associated with cotton leaf curl disease in China
DBLINKS	KEGG BRITE: NC_003199 NC_004607 ICTV: 202303229 ViralZone: genus, family

Scientific Name	Cotton leaf curl Multan virus-[Faisalabad2] [TAX:223255]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Cotton leaf curl Multan virus
GenBank	AJ496287 Cotton leaf curl Multan virus-[Faisalabad2] complete sequence, isolate 31cf.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Cotton leaf curl Shahdadpur virus [TAX:674996]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; unclassified Begomovirus
RefSeq	NC_029648 Cotton leaf curl Shadadpur virus, complete genome, isolate Sha.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_029648 ICTV: 202303228 ViralZone: genus, family

Scientific Name	Cotton leaf curl virus [TAX:53010]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; unclassified Begomovirus
RefSeq	NC_031760 Cotton leaf curl virus isolate Faz-14, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_031760 ViralZone: genus, family

Scientific Name	Cotton leaf curl virus LKO-2 [TAX:727987]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; unclassified Begomovirus
GenBank	GU440580 Cotton leaf curl virus LKO-2 isolate Lucknow, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Cotton leafroll dwarf virus [TAX:312295]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus
RefSeq	NC_014545 Cotton leafroll dwarf virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014545 ICTV: 202303781 ViralZone: genus, family

Scientific Name	Cotton yellow mosaic virus [TAX:79236]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_077719 Cotton yellow mosaic virus isolate BN-Gos-San2-14 segment DNA-A, complete sequence. NC_077720 Cotton yellow mosaic virus isolate BN-Gos-San2-14 segment DNA-B, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_077719 NC_077720 ICTV: 202305796 ViralZone: genus, family

Scientific Name	Nanovirus-like particle [TAX:96892]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites
RefSeq	NC_039079 Nanovirus-like particle rep gene, isolate 1. NC_039080 Nanovirus-like particle rep gene for replication-associated protein. NC_039081 Nanovirus-like particle rep gene for replication associated protein, clone SB45-2.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039079 NC_039080 NC_039081 ICTV: 202305676, 202305682, 202305685

Scientific Name	Tomato leaf curl alphasatellite [TAX:1407057]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite; Tomato leaf curl Pakistan alphasatellite
RefSeq	NC_075984 Tomato leaf curl alphasatellite isolate SZ 258, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_075984 ICTV: 202307294