Capsicum

Capsicum

Scientific Name	Capsicum [TAX:4071]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae

Known viruses (24)

Scientific Name	African eggplant mosaic virus [TAX:3240745]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus melongenae
RefSeq	NC_043537 African eggplant mosaic virus isolate 2013-281, complete genome.
Evidence	Literature
Reference	PMID: 33081084
Authors	Ibaba JD, Gubba A
Title	High-Throughput Sequencing Application in the Diagnosis and Discovery of Plant-Infecting Viruses in Africa, A Decade Later.
Journal	Plants (Basel). 2020 Oct 16;9(10).
DBLINKS	KEGG BRITE: NC_043537 ICTV: 202306671 ViralZone: genus, family

Scientific Name	African eggplant yellowing virus [TAX:1963256]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus; Polerovirus AEYV
RefSeq	NC_034207 African eggplant yellowing virus isolate eMA4, complete genome.
Evidence	Literature
Reference	PMID: 28220324
Authors	Afouda L, Kone D, Zinsou V, Dossou L, Kenyon L, Winter S, Knierim D
Title	Virus surveys of Capsicum spp. in the Republic of Benin reveal the prevalence of pepper vein yellows virus and the identification of a previously uncharacterised polerovirus species.
Journal	Arch Virol. 2017 Jun;162(6):1599-1607.
DBLINKS	KEGG BRITE: NC_034207 ICTV: 202318622 ViralZone: family, genus

Scientific Name	Beet curly top virus [TAX:10840]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Curtovirus; Curtovirus betae
RefSeq	NC_001412 Beet curly top virus - California [Logan], complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001412 KEGG GENOME: T40130 ICTV: 202303503 ViralZone: genus, family Descriptions of Plant Viruses: 210

Scientific Name	Bell pepper mottle virus [TAX:368735]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus; Tobamovirus maculacapsici
RefSeq	NC_009642 Bell pepper mottle tobamovirus, complete genome.
Evidence	Literature
Reference	PMID: 17334946
Authors	Rhie MJ, Min BE, Hong JS, Song YS, Ryu KH
Title	Complete genome sequence supports bell pepper mottle virus as a species of the genus Tobamovirus.
Journal	Arch Virol. 2007;152(7):1401-7.
DBLINKS	KEGG BRITE: NC_009642 ICTV: 202305421 ViralZone: family, genus

Scientific Name	Chili leaf curl Bhatinda betasatellite [TAX:1335766]
Lineage	Viruses; Viruses incertae sedis; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_021345 Chili leaf curl Bhatinda betasatellite isolate AnAv, complete sequence.
DBLINKS	KEGG BRITE: NC_021345 ViralZone: family, genus

Scientific Name	Chilli leaf curl Ahmedabad virus-India [India/Ahmedabad/2014] [TAX:1678003]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; unclassified Begomovirus
RefSeq	NC_028046 Chilli leaf curl Ahmedabad virus-India [India/Ahmedabad/2014], complete genome.
DBLINKS	KEGG BRITE: NC_028046 ICTV: 202306696 ViralZone: family, genus

Scientific Name	Chilli leaf curl alphasatellite [TAX:1428342]
Lineage	Viruses; Viruses incertae sedis; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite; Colecusatellite capsici
RefSeq	NC_039234 Chilli leaf curl alphasatellite clone VIRO 273, complete sequence.
Evidence	Literature
Reference	PMID: 28062387
Authors	Vinoth Kumar R, Singh D, Singh AK, Chakraborty S
Title	Molecular diversity, recombination and population structure of alphasatellites associated with begomovirus disease complexes.
Journal	Infect Genet Evol. 2017 Apr;49:39-47.
DBLINKS	KEGG BRITE: NC_039234 ICTV: 202305681 ViralZone: family

Scientific Name	Chilli leaf curl India alphasatellite [TAX:1507725]
Lineage	Viruses; Viruses incertae sedis; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites
RefSeq	NC_027431 Chilli leaf curl India alphasatellite clone VIRO 391, complete sequence.
Evidence	Literature
Reference	PMID: 28062387
Authors	Vinoth Kumar R, Singh D, Singh AK, Chakraborty S
Title	Molecular diversity, recombination and population structure of alphasatellites associated with begomovirus disease complexes.
Journal	Infect Genet Evol. 2017 Apr;49:39-47.
DBLINKS	KEGG BRITE: NC_027431 ViralZone: family

Scientific Name	Chilli leaf curl virus [TAX:172278]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus chillicapsici
RefSeq	NC_004628 Chilli leaf curl virus, complete genome.
Evidence	Literature
Reference	PMID: 23911631
Authors	Khan AJ, Akhtar S, Al-Zaidi AM, Singh AK, Briddon RW
Title	Genetic diversity and distribution of a distinct strain of Chili leaf curl virus and associated betasatellite infecting tomato and pepper in Oman.
Journal	Virus Res. 2013 Oct;177(1):87-97.
DBLINKS	KEGG BRITE: NC_004628 ICTV: 202303210 ViralZone: family, genus

Scientific Name	Cotton leaf curl betasatellite [TAX:134386]
Lineage	Viruses; Viruses incertae sedis; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_003200 Cotton leaf curl virus-associated DNA beta, complete genome. NC_017829 Cotton leaf curl virus betasatellite, complete genome. NC_076960 Cotton leaf curl betasatellite complete sequence, isolate IS-6. NC_076961 Cotton leaf curl virus betasatellite complete sequence, isolate Kashmir 1.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_003200 NC_017829 NC_076960 NC_076961 ICTV: 202309195, 202309196 ViralZone: family, genus

Scientific Name	Pepper enamovirus [TAX:2073163]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Enamovirus; Enamovirus PEEV
RefSeq	NC_037052 Pepper enamovirus isolate R1 ORF0, replicase polyprotein, coat protein, and ORF5 genes, complete cds.
Evidence	Literature
Reference	First report of Pepper veinal mottle virus, Pepper yellows virus and a novel enamovirus in chilli pepper(Capsicum sp.) in Rwanda
DBLINKS	KEGG BRITE: NC_037052 ICTV: 202318498 ViralZone: family, genus

Scientific Name	Pepper golden mosaic virus [TAX:223301]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus capsicummusivi
RefSeq	NC_004096 Pepper golden mosaic virus DNA B, complete sequence. NC_004101 Pepper golden mosaic virus DNA A, complete sequence.
Evidence	Literature
Reference	PMID: 18944336
Authors	Méndez-Lozano J, Torres-Pacheco I, Fauquet CM, Rivera-Bustamante RF
Title	Interactions Between Geminiviruses in a Naturally Occurring Mixture: Pepper huasteco virus and Pepper golden mosaic virus.
Journal	Phytopathology. 2003 Mar;93(3):270-7.
DBLINKS	KEGG BRITE: NC_004096 NC_004101 ICTV: 202303306 ViralZone: family, genus

Scientific Name	Pepper leaf curl virus [TAX:83839]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus capsici
RefSeq	NC_000882 Pepper leaf curl virus, complete genome.
DBLINKS	KEGG BRITE: NC_000882 ICTV: 202303310 ViralZone: family, genus

Scientific Name	Pepper vein yellows virus [TAX:909827]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus; unclassified Polerovirus
RefSeq	NC_015050 Pepper vein yellows virus genomic RNA, complete genome. NC_075416 Pepper vein yellows virus isolate HN, complete genome. NC_075422 Pepper vein yellows virus isolate 12KNX1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_015050 NC_075416 NC_075422 ICTV: 202303785, 202306622, 202306623 ViralZone: family, genus

Scientific Name	Pepper yellow dwarf virus - Mexico [TAX:1987360]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Curtovirus; unclassified Curtovirus
RefSeq	NC_034629 Pepper yellow dwarf virus - Mexico strain PepYDV-Curto, complete genome.
DBLINKS	KEGG BRITE: NC_034629 ViralZone: genus, family

Scientific Name	Pepper yellow leaf curl China virus [TAX:1288829]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus malvastrumyunnanense; Malvastrum yellow vein Yunnan virus
GenBank	KC149941 Pepper yellow leaf curl China virus isolate YN57-18, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Pepper yellow leaf curl virus [TAX:881944]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus capsicumchinaense
RefSeq	NC_020236 Pepper yellow leaf curl virus isolate YN65-1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_020236 ICTV: 202303313 ViralZone: family, genus

Scientific Name	Potato virus Y [TAX:12216]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus yituberosi
RefSeq	NC_001616 Potato virus Y, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001616 KEGG GENOME: T40141 ICTV: 202304670 ViralZone: genus, family Descriptions of Plant Viruses: 414, 37, 242

Scientific Name	Potato virus Y strain C [TAX:12217]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus yituberosi; Potato virus Y
GenBank	EU563512 Potato virus Y strain C isolate PRI-509, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Potato virus Y strain O [TAX:12220]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus yituberosi; Potato virus Y
GenBank	JQ924285 Potato virus Y strain O isolate YO-ANT25, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Tobacco curly shoot virus - [SC118] [TAX:705074]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus nicotianae; Tobacco curly shoot virus
GenBank	GU001879 Tobacco curly shoot virus - [SC118], complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Tomato leaf curl Gujarat virus [TAX:219299]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus solanumgujaratense
RefSeq	NC_004558 Tomato leaf curl Gujarat virus - [Varanasi] segment A, complete sequence. NC_004559 Tomato leaf curl Gujarat virus - [Varanasi] segment B, complete sequence.
Evidence	Literature
Reference	PMID: 18943612
Authors	Chakraborty S, Pandey PK, Banerjee MK, Kalloo G, Fauquet CM
Title	Tomato leaf curl Gujarat virus, a New Begomovirus Species Causing a Severe Leaf Curl Disease of Tomato in Varanasi, India.
Journal	Phytopathology. 2003 Dec;93(12):1485-95.
Comment	pepper pepper
DBLINKS	KEGG BRITE: NC_004558 NC_004559 ICTV: 202303425 ViralZone: family, genus

Scientific Name	Tomato mosaic virus [TAX:12253]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus; Tobamovirus tomatotessellati
RefSeq	NC_002692 Tomato mosaic virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002692 KEGG GENOME: T40137 ICTV: 202305449 ViralZone: family, genus Descriptions of Plant Viruses: 156

Scientific Name	Tomato mottle Taino virus [TAX:223358]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Begomovirus solanumtainoense
RefSeq	NC_001828 Tomato mottle Taino virus DNA A, complete sequence. NC_001917 Tomato mottle Taino virus DNA B, complete sequence.
Evidence	Literature
Reference	Ramos, P. L., Guerra, O., Peral, R., Oramas, P., Guevara, R. G., & Rivera-Bustamante, R. (1997). Taino tomato mottle virus, a new bipartite geminivirus from Cuba. Plant Disease, 81(9), 1095-1095.
DBLINKS	KEGG BRITE: NC_001828 NC_001917 ICTV: 202303468 ViralZone: family, genus