Saccharum officinarum

Saccharum officinarum

Scientific Name	Saccharum officinarum [TAX:4547]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum species complex

Known viruses (15)

Scientific Name	Fiji disease virus [TAX:77698]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Fijivirus
RefSeq	NC_007154 Fiji disease virus segment 2, complete genome. NC_007155 Fiji disease virus chromosome segment 4, complete genome. NC_007156 Fiji disease virus segment 9, complete sequence. NC_007157 Fiji disease virus segment 6, complete genome. NC_007158 Fiji disease virus segment 3, complete genome. NC_007159 Fiji disease virus segment 1, complete genome. NC_007160 Fiji disease virus segment 5, complete genome. NC_007161 Fiji disease virus segment 8, complete genome. NC_007162 Fiji disease virus segment 10, complete genome. NC_007163 Fiji disease virus segment 7, complete sequence.
Evidence	UniProt
Evidence	Literature
Reference	MOLECULAR CHARACTERIZATION OF FIJI DISEASE FIJIVIRUS GENOME SEGMENTS 5, 7, 8 AND 10
DBLINKS	KEGG BRITE: NC_007154 NC_007155 NC_007156 NC_007157 NC_007158 NC_007159 NC_007160 NC_007161 NC_007162 NC_007163 ICTV: 202304950 ViralZone: family, genus

Scientific Name	Maize streak virus - E[Pat] [TAX:268331]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus; Maize streak virus
GenBank	AF329888 Maize streak virus - E[Pat] isolate MSV-Pat, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Maize streak virus - [Raw] [TAX:268343]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus; Maize streak virus
GenBank	AF329889 Maize streak virus - [Raw], complete genome.
Evidence	UniProt
DBLINKS	ICTV: 202303525 ViralZone: genus, family

和名	ソルガムモザイクウイルス
Scientific Name	Sorghum mosaic virus [TAX:32619]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Potyvirus sorghitessellati
RefSeq	NC_004035 Sorghum mosaic virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_004035 KEGG GENOME: T40202 ICTV: 202304678 ViralZone: genus, family Descriptions of Plant Viruses: 359

Scientific Name	Sugarcane bacilliform Guadeloupe A virus [TAX:1960252]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus; Badnavirus alphasacchari
RefSeq	NC_038382 Sugarcane bacilliform Guadeloupe A virus clone 1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038382 ICTV: 202302851 ViralZone: family, genus

Scientific Name	Sugarcane bacilliform Guadeloupe D virus [TAX:1960253]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus; Badnavirus betasasacchari
RefSeq	NC_013455 Sugarcane bacilliform Guadeloupe D virus isolate BataviaD, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_013455 ICTV: 202302852 ViralZone: family, genus

Scientific Name	Sugarcane bacilliform IM virus [TAX:362398]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Caulimoviridae; Badnavirus; Badnavirus gammasacchari
RefSeq	NC_003031 Sugarcane bacilliform IM virus, complete genome.
Evidence	Literature
Reference	PMID: 12491105
Authors	Geijskes RJ, Braithwaite KS, Dale JL, Harding RM, Smith GR
Title	Sequence analysis of an Australian isolate of sugarcane bacilliform badnavirus.
Journal	Arch Virol. 2002 Dec;147(12):2393-404.
Comment	Saccharum officinarum
DBLINKS	KEGG BRITE: NC_003031 ICTV: 202302853 ViralZone: family, genus

Scientific Name	Sugarcane chlorotic streak virus [TAX:1919062]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus
RefSeq	NC_032004 Sugarcane chlorotic streak virus isolate Sc10-SR-1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_032004 ICTV: 202305855 ViralZone: genus, family

Scientific Name	Sugarcane streak Egypt virus - [Giza] [TAX:268785]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus; Sugarcane streak Egypt virus
RefSeq	NC_001868 Sugarcane streak Egypt virus - [Giza], complete genome.
DBLINKS	KEGG BRITE: NC_001868 ICTV: 202303534 ViralZone: genus, family

Scientific Name	Sugarcane streak Reunion virus [TAX:78395]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus
RefSeq	NC_004755 Sugarcane streak virus reunion, complete genome.
Evidence	Literature
Reference	PMID: 10664387
Authors	Bigarré L, Salah M, Granier M, Frutos R, Thouvenel J, Peterschmitt M
Title	Nucleotide sequence evidence for three distinct sugarcane streak mastreviruses.
Journal	Arch Virol. 1999;144(12):2331-44.
Comment	sugarcane
DBLINKS	KEGG BRITE: NC_004755 ICTV: 202303535 ViralZone: genus, family

Scientific Name	Sugarcane streak virus [TAX:10836]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus
RefSeq	NC_003744 Sugarcane streak virus - [Natal], complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003744 ICTV: 202303536 ViralZone: genus, family

Scientific Name	Sugarcane striate mosaic-associated virus [TAX:167927]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Quinvirinae; Sustrivirus; Sustrivirus SCSMaV
RefSeq	NC_003870 Sugarcane striate mosaic-associated virus, complete genome.
Evidence	Literature
Reference	PMID: 11676409
Authors	Thompson N, Randles JW
Title	The genome organisation and taxonomy of Sugarcane striate mosaic associated virus.
Journal	Arch Virol. 2001 Aug;146(8):1441-51.
Comment	Sugarcane
DBLINKS	KEGG BRITE: NC_003870 ICTV: 202302298

Scientific Name	Sugarcane striate virus [TAX:1868659]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus
RefSeq	NC_035179 Sugarcane striate virus isolate SCStV_GP_TC9-3_2013, complete genome. NC_075107 Sugarcane striate virus isolate WZG, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	Molecular detection of sugarcane striate virus and sugarcane white streak virus and their prevalence in the Miami World Collection of sugarcane and related grasses
DBLINKS	KEGG BRITE: NC_035179 NC_075107 ICTV: 202305856 ViralZone: genus, family

Scientific Name	Sugarcane white streak virus [TAX:1492296]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus
RefSeq	NC_023989 Sugarcane white streak virus isolate SSNV-B [SD-B0069-2013], complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023989 ICTV: 202303537 ViralZone: genus, family

Scientific Name	Sugarcane yellow leaf virus [TAX:94290]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Sobelivirales; Solemoviridae; Polerovirus
RefSeq	NC_000874 Sugarcane yellow leaf virus complete genome.
Evidence	Literature
Reference	PMID: 10725208
Authors	Moonan F, Molina J, Mirkov TE
Title	Sugarcane yellow leaf virus: an emerging virus that has evolved by recombination between luteoviral and poleroviral ancestors.
Journal	Virology. 2000 Mar 30;269(1):156-71.
DBLINKS	KEGG BRITE: NC_000874 ICTV: 202303788 ViralZone: genus, family