Metabolite

KNApSAcK Entry

id C00000321
Name Genipin
CAS RN 6902-77-8
Standard InChI InChI=1S/C11H14O5/c1-15-10(13)8-5-16-11(14)9-6(4-12)2-3-7(8)9/h2,5,7,9,11-12,14H,3-4H2,1H3
Standard InChI (Main Layer) InChI=1S/C11H14O5/c1-15-10(13)8-5-16-11(14)9-6(4-12)2-3-7(8)9/h2,5,7,9,11-12,14H,3-4H2,1H3

Cluster

Phytochemical cluster No. 36
KCF-S cluster No. 8306

Link

ChEMBL

By standard InChI
By standard InChI Main Layer CHEMBL459016 CHEMBL1317787

KEGG

By LinkDB C09780

CTD

By CAS RN C007834

Human Protein / Gene in interaction

6 ChEMBL Protein in interactions

accession description class description compound assay ID (# of activities) # of diseases
(OMIM / KEGG)
Q99700 Ataxin-2 Unclassified protein CHEMBL1317787 CHEMBL2114784 (1)
1 / 1
P60033 CD81 antigen Unclassified protein CHEMBL459016 CHEMBL1099753 (1)
1 / 1
O75496 Geminin Unclassified protein CHEMBL1317787 CHEMBL2114843 (1)
0 / 0
P83916 Chromobox protein homolog 1 Unclassified protein CHEMBL1317787 CHEMBL1794401 (1)
0 / 0
O75874 Isocitrate dehydrogenase [NADP] cytoplasmic Enzyme CHEMBL1317787 CHEMBL2354311 (1)
1 / 0
Q8IUX4 DNA dC->dU-editing enzyme APOBEC-3F Enzyme CHEMBL1317787 CHEMBL1963966 (1)
0 / 0

CTD interaction (3)

compound gene gene name gene description interaction interaction type form reference
pmid
C007834 581 BAX
BCL2L4
BCL2-associated X protein genipin results in increased expression of BAX mRNA increases expression
mRNA 22245672
C007834 596 BCL2
Bcl-2
PPP1R50
B-cell CLL/lymphoma 2 genipin results in decreased expression of BCL2 mRNA decreases expression
mRNA 22245672
C007834 836 CASP3
CPP32
CPP32B
SCA-1
caspase 3, apoptosis-related cysteine peptidase (EC:3.4.22.56) genipin results in increased activity of CASP3 protein increases activity
protein 22245672

Related Disease

Diseases related to proteins in ChEMBL interactions

OMIM (3)

OMIM preferred title UniProt
#137800 Glioma susceptibility 1; glm1 O75874
#613496 Immunodeficiency, common variable, 6; cvid6 P60033
#183090 Spinocerebellar ataxia 2; sca2 Q99700

KEGG DISEASE (2)

KEGG disease name UniProt
H00088 Common variable immunodeficiency (CVID) P60033 (related)
H00063 Spinocerebellar ataxia (SCA) Q99700 (related)

Diseases related to CTD interactions

1 disease from interactions of metabolites

MeSH disease OMIM compound disease name evidence type reference
pmid
D002779 C007834 Cholestasis marker/mechanism
20374298