KEGG   Aedes albopictus (Asian tiger mosquito): 109425944
Entry
109425944         CDS       T06060                                 
Name
(RefSeq) LOW QUALITY PROTEIN: 3'-5' RNA helicase YTHDC2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
Organism
aalb  Aedes albopictus (Asian tiger mosquito)
Brite
KEGG Orthology (KO) [BR:aalb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aalb03041]
    109425944
Enzymes [BR:aalb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109425944
Spliceosome [BR:aalb03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    109425944
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD R3H HA2_N Ank_2 YTH AAA_19 Ank Ank_5 nSTAND3 ATPase ResIII T2SSE Ank_3 PhoH AAA_11 Ank_4 ABC_tran Zeta_toxin AAA_22 TrwB_AAD_bind FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 109425944
NCBI-ProteinID: XP_019556894
Position
Unknown
AA seq 1296 aa
MAGRGKTNINIEEDVRIAIHYMIDKFVQDEKLNEFDFPASFTREHRAYIHDYVKNKSLKS
RSHGKGNQRYLTIYKSNILSLIHDDASLDISENSQKTIEMILQKQGPFQKELADSYARRK
LYPTLTSYSLNLGSPNNSVKCIPPPTNSSMQIIQERLRLPIAPYRDAILNCLAQNQVMII
SGSTGSGKTTQIPQFILESATQQGEVCRIICTQPRRLSAITVADRVSYERNEQLGQTIGY
QIRLESRLSPITNLIFCTNGVLLRCLMGKNSTSILNDVTHIIVDEVHERDQYSDFLLISL
KEKVLQHTNIKVILMSATIESNTFSRYFNNCPLIEIPGRLFPIESYFLEDVLYRIDRYNA
KIDEVKRQFKSTPDFARALAQNPHRTELVNTANMDDETILLMNDILELCWIENNPDDFNH
FFYLVEDENNPINFQHTETKMTALMIAAAKGYTNVVKRLIDMGADPMIKGKHNFTALDWS
VSINGYNACSQMLDMVTHPQQQQVQQQLQQPLPQLQTPPRQLAKVLLDVYHSTVNDEKID
HRLILDIIKYICTKLAPGAILVFLPGYDDILEQYEMIYCGLSGSSNFRIYMLHSNMQTND
QNAVFKPVPPNTRKIILSTNIAETSITIDDVVYVIDSGKVKQKHYDSVTSTTSLTATWIS
QACATQRAGRAGRTKPGVCFRLFTRQRFDAMDKFTLPEILRVPLTEICLQTSIIASHTSI
LNFLSKAIQPPSTMSIKQSIKLLQKLGALDDDENLTELGLILADLPVDARLGKILLYGIF
LKCIDPVLTIVSALSVNDPFVLPTTALDKDKAAKLKRDMAEDSYSDCLCLLRAFQKWNEL
KPSMKERQFCNRFFLNSGTMDTIGSLRSKILGHLRSVGLVKSYGAGNIQDLNQNSDNWAV
VKACLVAGLYPNICRVDKENATIKTRIDKKISPHPSSVIRDKSLKKNKESILSLPSEWII
FEEKTRAGIHCLIKCNTVVAPVTIALFCGPLFLNEEESLISWKDLDESNSDYDEHDMSDK
SKLIVDDWINFAVDSNFGTSVFHFRHKLSALFLKFISHPRSYQPNANDLYLLNTVAQLLK
DEDRHLGFAGHSNIGQKPRPVIQNHLNVNGGVGNAFNFSANDFKLAASSHNNSNNGNGNS
SHNNSSNNKHQNRHQQQHHHGNKQQNNNNRKGEPKVRYFIVHATSIMQIQLVTESPDGWS
FTPSLQPKLIKLLKKQPNLSIILFFHISQSKCFYGAGRLTLVANRTHLNLFSKNTVSFET
LSTFEKSFMRGRVLEEYLDGEELSPSSGHELMEFFK
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggccggccgaggaaaaaccaacataaacattgaggaggatgttcgcatcgccattcac
tacatgatcgacaagttcgtccaggacgagaagctgaacgagtttgactttccggcttcg
ttcacccgggagcaccgggcctacatccacgattacgtcaaaaacaaatcgctcaagtcc
aggtcccatgggaaaggcaaccaacgctacctgacgatctacaaatcgaacatcctatcg
ctaatccacgacgatgcaagcctggacatcagtgagaattcgcagaagacgattgaaatg
atactccagaagcagggccccttccaaaaggaactggcagactcctatgcgcggcgcaag
ttgtatcccaccctgacatcctacagtctgaacctgggatcgccgaacaattccgtcaaa
tgcatcccgccaccgacaaactccagcatgcaaatcatccaggagcggcttcggctgccg
attgctccctacagagacgccattctgaactgcttggcgcagaatcaggtaatgatcatt
tcgggtagcaccggttccggcaagactacccaaattccacagttcattcttgagtccgcc
acccaacaaggcgaagtctgcaggatcatttgtactcagccacgacgtctgtcggcgatc
accgtagccgatcgagtcagttacgagcggaatgaacaacttggacagacaattggctac
cagattcggctcgaaagtcgactgagtccgatcaccaaccttattttctgcacaaacggt
gttctccttcgatgtctaatgggcaagaattccaccagtattctgaacgacgtgacccac
attatcgtggacgaagttcatgaacgcgatcagtattcggactttttgctgatctcgctg
aaggagaaagtcctgcagcacacgaacatcaaagttatcctcatgtctgccaccatcgaa
tccaacacattttcgcgctacttcaacaactgtccactgatcgaaatccccggaaggctg
ttccccatcgagagctacttcctggaggatgtcctgtaccgaatcgatcgctacaacgcc
aagatcgacgaagtcaaacgacagttcaaaagcacacctgactttgcccgagcgctggcg
caaaatccgcatcggacggagctggtcaacacggccaacatggacgacgagacgattctg
ctgatgaatgacatcctcgagttgtgctggatcgagaacaatccggatgatttcaatcac
tttttctatctggttgaggacgaaaacaatccgatcaattttcagcataccgaaacgaag
atgacggcgctcatgattgccgcggcaaaaggatacacgaatgtggtgaaacgactgata
gacatgggagcggatccgatgatcaaaggcaagcacaattttactgcgctggattggtcc
gtcagcatcaatggttacaacgcgtgttcgcaaatgttggatatggtcactcatccacag
caacagcaggttcagcagcaacttcaacagccacttcctcagctgcaaaccccgccaaga
cagcttgccaaggttctgctcgatgtgtatcacagcacggtgaacgacgagaaaattgat
caccgcttgattctagacatcatcaagtatatctgcacgaagctggcgccgggagcaatc
ctagtgtttctccctggctacgacgacattctagagcagtatgaaatgatatattgtggc
ttgagcggatcgtcgaacttccgaatctacatgctgcatagcaatatgcaaacaaacgat
cagaatgcagtgtttaagccggttccgccgaacaccaggaagatcatcctttctacgaat
atcgcagaaacttcgatcaccatcgatgatgtcgtgtatgtgatcgatagtggaaaggtg
aaacagaaacactacgactcggttacatcgacaacctccttgacggcgacgtggatttcg
caagcatgtgcaacccagcgggccggacgagctggtcgaacgaagcccggtgtgtgtttc
cgattgttcacacggcaaaggttcgatgcgatggataagtttacactgccggagattcta
cgcgttccgttgacggagatttgcctgcaaacgtccatcattgccagccacacatcgatt
ctgaacttcctgagcaaagccatacagccaccgtctacgatgagcattaaacagagcatc
aagctactgcagaagctaggcgcactggatgacgacgagaacctgacggaactgggattg
atcctggcggatctgcccgtggatgcccgattagggaagatcttgttgtacggcatcttc
ttgaagtgcatcgatccggtgctgacgattgtcagtgcgctgagcgtgaacgatccgttc
gtgctgcccacgacggccctggacaaggacaaagcagccaaattgaagcgggacatggca
gaggattcctatagcgattgtttgtgcttgctgcgggcgttccagaagtggaatgagcta
aaaccatcgatgaaggagcgccagttttgtaatcgtttcttcctgaattcgggtacaatg
gataccatcggaagcctgcgaagtaagattctcggccatttgcgttcggtgggtttggtc
aaaagctacggagccggtaacattcaagatctgaaccaaaactcagacaactgggccgtg
gtgaaagcgtgcctggtggccggtttgtatccgaacatctgtcgcgtggataaagaaaat
gccacgattaagacaaggatcgacaagaagatcagtccacatcctagctcggtgatcaga
gacaaatctctgaagaagaacaaggaaagcatcctatcgctgccgtcggagtggattatc
ttcgaggagaaaacgagagcgggaattcactgcctgatcaagtgcaatactgtagtagcg
ccagtgacgatcgcgctattttgcggtccgctgttcttaaacgaagaggaatcgcttatt
tcgtggaaggatctggatgaatcgaattcggactacgacgagcatgatatgtccgataag
agcaagttgatcgtggacgattggattaactttgctgtggacagcaacttcggtacctcg
gtgtttcattttcgacacaagctgagtgcgctcttcctcaagttcatcagccacccgaga
tcatatcagccgaacgcgaacgacttgtacctgttgaacacggtggcccagctgctgaaa
gacgaagatcgtcatctcggattcgccggccacagcaacattggccagaagcctcgacct
gtgatacagaaccacctgaatgtgaacggtggcgtcggaaatgctttcaatttctcggcg
aacgatttcaagctggctgccagcagtcacaacaacagcaacaatggcaatggaaacagc
agccacaacaatagcagcaacaacaaacatcagaacaggcaccagcagcagcaccatcac
gggaacaagcagcaaaataacaacaacaggaagggggaacccaaagtccgatactttatc
gtgcatgcgacgtccataatgcagatccagctggtgaccgagagtccagatggatggagt
ttcacgccatcgttgcaaccgaaacttatcaaactacttaagaaacaaccaaatctcagc
atcatcctgtttttccacatatcacagagcaaatgcttctacggagcaggtcggctgacg
ttggttgccaatcggacccatctgaatctattttccaagaacacggtctcatttgaaacg
ctaagtaccttcgagaagagttttatgcggggcagagtgctggaagagtacctcgacgga
gaggaactgtcgccctcgagtggacacgagctgatggaattcttcaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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