KEGG   Arthrobacter sp. LS16: AFL94_10160
Entry
AFL94_10160       CDS       T04078                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
arl  Arthrobacter sp. LS16
Pathway
arl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:arl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AFL94_10160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arl03400]
    AFL94_10160
DNA repair and recombination proteins [BR:arl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AFL94_10160
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AFL94_10160
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_16 DUF815 nSTAND3 AAA_5 AIG1 AAA_7 DUF87
Other DBs
NCBI-ProteinID: ALD64227
Position
complement(2205713..2207800)
AA seq 695 aa
MSLAQPIKRVVAPFEVISEYEPAGDQPQAIAELTQRIQAGEKDIVLLGATGTGKSATTAW
LVEQVQRPTLVLVQNKTLAAQLANEFRELMPNNAVEYFVSYYDYYQPEAYVPQTDTFIEK
DSSINEEVERLRHSATNSLLTRRDTIVVATVSCIYGLGTPEEYVAGMVTVRQGEELNRDA
MLRQFVAMQYTRNDMDFHRGTFRVRGDTVEIIPMYEEQAVRIEFFGDEVEAIYTLHPVTG
EVIREETEMYIFPASHYVAGAERMHKAIKSIEDELATRLKELESQNKLVEAQRLRMRTTY
DLEMMEQMGFCNGIENYSRHIDGRAPGSAPHCLLDYFPDDFLLVIDESHVTVPQIGAMYE
GDMSRKRTLVEHGFRLPSAMDNRPLKWDEFLERIGQTVYLSATPGKYELGKSDGFVEQII
RPTGLIDPEIIVKPTKGQIDDLLDEIRTRVDRDERVLVTTLTKRMAEDLTDYLTEHQVRV
QYLHSDVDTIRRVELLRELRMGSFDVLVGINLLREGLDLPEVSLVAILDADKQGFLRSAT
SLIQTIGRAARNVSGQVVMYADKITDAMSQAIEETNRRRQIQRAHNEKHGIDPMPLRKKI
ADITDQLAREDADTQELLNNNRLAKGAKRTSASSTVRKDGLAAAPAEDLLGQIEEMTGQM
HAAAAELQFELAARLRDEVAELKKELRQMKAAGHA
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgagtcttgcacagcccatcaaacgagttgtcgcccccttcgaggtcatcagcgaatac
gagcctgctggcgaccagccgcaggccatcgcggagctgacgcagcggatccaggccggt
gagaaggacatcgtgctgctcggcgcgaccggtaccggcaaatccgcgaccaccgcctgg
ctggtcgagcaggtgcagcgccccaccctggtactggtgcagaacaagaccctggccgcc
cagttggccaacgagttccgcgagctgatgccgaacaacgcggtcgagtacttcgtgtcc
tactacgactactaccagcccgaggcctacgtgccgcagaccgataccttcattgagaag
gactcctctatcaacgaggaggtcgaaaggctgcgccactcggccaccaactcgctgctg
acccgccgcgacaccatcgtggtcgctacggtctcctgcatctacggcctgggcaccccg
gaggagtatgtcgccgggatggtgacggtgcgccaaggcgaggagctgaaccgcgacgcg
atgctgcgccagttcgtggccatgcagtacacccgcaacgacatggacttccaccgcggc
accttccgggtgcgcggggacaccgtggagatcatcccgatgtacgaggagcaggcggtg
cgcatcgagttcttcggcgacgaggtggaagcgatctacacgctgcatccggtcaccggc
gaggtgatccgcgaggaaaccgagatgtacatcttcccggccagccattacgtggcggga
gccgagcgcatgcacaaggcgatcaagtccatcgaggacgagctggcaacgcggctgaag
gaactggagtcgcagaacaagctcgtcgaggcccagcggctgcgcatgcgcaccacctac
gacctggaaatgatggagcagatgggcttctgcaacggcatcgagaactattcgcggcac
atcgacggtcgtgcgccgggttccgccccgcactgcctgctggattacttcccagacgac
ttcctgctggtcatcgacgaatcccacgtgaccgtaccgcagatcggagccatgtacgag
ggcgacatgtcgcgcaagcgcacgctggtggagcacgggttccgcctgcccagcgcgatg
gacaaccgtccgctgaaatgggatgagttcctggagcgcatcgggcagacggtgtacctg
tcggctaccccgggaaagtacgagctgggcaagtccgacggcttcgtggagcagatcatc
cgccctaccggcttgatcgacccggaaatcatcgtcaagccgaccaagggccagatcgac
gacctgctggacgagatccgcacccgcgtggatcgcgacgaacgcgtgctggtcaccacc
ctgaccaagcgcatggcggaagacctgaccgactacctgaccgagcaccaggtgcgcgtg
cagtacctgcactcggacgtggacacgatccggcgcgtggagttgctgcgcgaactgcgc
atgggctccttcgatgtgctggtgggcatcaacctgctgcgcgagggccttgacctgccc
gaggtgtcgcttgtggcgatcctggatgccgacaagcaaggcttcctgcgctcggcgact
tcgctgatccagaccatcggccgcgcagcccgcaacgtgtccggccaggtggtcatgtac
gcggacaagatcaccgacgccatgagccaggcgatcgaggagaccaaccgccgccggcag
atccagcgggcgcacaacgagaagcacggcatcgacccgatgccgctgcgcaagaagatc
gcggacatcaccgaccagctggccagggaggacgccgacacccaggagctgctgaacaac
aaccggttagccaagggcgccaagcgcacctcggcgtcgtcgacagtgcgcaaggacggc
ctggccgccgcgccggccgaagacctgctgggccagatcgaagagatgaccggacagatg
cacgcggcggcggccgagctgcagttcgagctggcggcccggctgcgtgacgaggtggcg
gagctgaagaaggagctgcggcagatgaaggccgccggccacgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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