KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103003261
Entry
103003261         CDS       T03086                                 
Symbol
YTHDC2
Name
(RefSeq) YTH domain containing 2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bacu03041]
    103003261 (YTHDC2)
Enzymes [BR:bacu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103003261 (YTHDC2)
Spliceosome [BR:bacu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    103003261 (YTHDC2)
SSDB
Motif
Pfam: YTH HA2_C Helicase_C OB_NTP_bind R3H DEAD Ank_2 AAA_19 HA2_N nSTAND3 Ank AAA_22 ATPase PhoH AAA_7 AAA_16 AAA_29 UvrD-helicase Ank_4 T2SSE SRP54 AAA_23 ResIII
Other DBs
NCBI-GeneID: 103003261
NCBI-ProteinID: XP_007192174
UniProt: A0A384AYM1
Position
Un
AA seq 1430 aa
MSRPSSVSPRPSAPGRGGGSCPAPCGLAGGGRAKGLKDIRIDEEVKIAVNIALERFRYGD
QREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGASRYLTVKKKDGSETAHAMMTCNLT
HNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVK
RGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIP
CRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL
MAGDSSLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFMRYF
GSCPVTYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREERQQTTLTEWYSAQEN
TFKPESQRQRAVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHK
DVDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGANVHIKASNG
WMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFD
DEKVDLDLIMHLLYNICHSCDSGAILIFLPGYDEIVGLRDRILFDDRRFADNTHRYQVFM
LHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFV
TMLKMVWISKASAIQRKGRAGRGRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHT
KLLAPVNCPIADFLMKAPEPPPALIVRNAVHMLKTIDAMDAWEDLTELGYHLADLPVEPH
LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMAL
LRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRD
VNTNSENWAVVKAALVAGMYPHLVHVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPA
NGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLIFCGPARLASNALQEPSSF
RADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRKKWHSLFLRRMRA
PSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRK
ISADTEFSAESTTAERVLMESPSPALHPPQKYKDRGILHPKRSTDDRSDQSSVKSTDSNS
YPSPCASPSSPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNEQKL
NRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLP
FQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLSLGEKTTTD
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgtccaggccgagcagcgtctccccgcggccgtcggctcctggaaggggcggcgggagc
tgcccggcgccgtgtggccttgcgggcggcggccgggccaaggggctgaaggacattcgt
atagacgaggaggtgaagatcgcggtcaatatcgctctggagcgcttccgatacggggac
cagagagaaatggaatttccttcttctttgaccagtacggaaagagcctttattcatcga
ttgagtcagtctcttggtttggtttctaaaagtaaaggaaagggagcaagtagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtactgaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
cgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaa
agaggagaatctgaatttgattctttcaggcagtctctgccagtgtttgagaaacaagaa
gaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtct
ggaaagactacacagattcctcagttccttttagatgattgctttaaaaatggtatcccc
tgccgtatattttgtactcaaccaagacgattagcagctattgctgtggctgaaagagtt
gctgcagagagaagagaaaggattggtcagacaattgggtaccagatccgtttagaaagc
agggtttctccaaagacacttctgacattttgcaccaatggggtactgcttcgtactctg
atggcaggagatagttcattgtcaactgtgacacatgttattgtggatgaagtacatgaa
agggatcgatttagtgattttttacttacaaagttaagagatttgttgcagaagcaccca
actttgaaactaattctttctagtgctgccttagatgtaaatctttttatgagatatttc
gggagttgtccagtgacatacatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagacattttaagaactactggatacacaaacaaagaaatgttaaaatacaaaaaggaa
aaacaacgagaggaaagacaacaaaccacacttacagaatggtactcagctcaagagaat
actttcaagcctgaatctcagagacagagagctgtcccaaatgtgactgaagaatatgat
ttattggatgatggtggtgatgccgtcttcagtcagttgacagaaaaagatgtgaattgc
cttgaaccatggttaataaaggaaatggatgcttgtctttctgacatatggctgcataaa
gatgttgatgcgtttgctcaggtctttcaccttattttaactgaaaatgttagtgtggat
tacagacatagtgaaaccagtgcaacagcgttgatggttgctgcaggacgaggtttttca
agtcaagtagaacagttaattagtatgggagccaatgttcatattaaagcatcaaatggc
tggatggctttagattgggctaaacactttgggcagacggaaattgtggatcttctagaa
tcttacagtgcttcattggaatttggaaatttagatgaaagttctttggttcaaacaaat
gggagtgatctcagtgcagaagacagagagctcctgaaagcttatcatcatagttttgat
gatgaaaaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgt
gattctggtgcaatattgattttcctgcctggatatgatgaaattgttggtctgagggat
cgcatcctgtttgatgacaggcggttcgctgacaatactcatagataccaagtctttatg
cttcattcaaatatgcaaacgtccgatcaaaagaaggtattaaaaaacccacctgcaggt
gttcgaaaaataatcctttccaccaatattgctgaaaccagcatcacagtcaatgacgtt
gtctttgttattgattctggtaaagtgaaagagaaatcctttgatgcactgaattttgtt
acaatgttaaaaatggtgtggatttccaaagctagtgccatacagcgaaaaggcagggca
gggagaggcagacctggaatttgtttccggctgttcagtagacttcgattccagaatatg
ttggaatttcagactccagaacttttgagaatgccattacaggaactttgtttacatacc
aagctcttagccccagttaattgtcctattgctgatttccttatgaaagctcctgaacct
ccaccagctttaattgtaagaaatgctgtgcacatgcttaagacaatagatgcaatggat
gcatgggaagatctcactgaacttggatatcatttggctgacttgccagtagaaccacat
cttggtaaaatggtcctgtgtgctgtggtgttaaagtgtctggaccccatccttacaatt
gcctgcacactagcctatcgagatccttttgtcctgccaacgcaggcctctcaaaaacgt
gcagctatgctttgtaggaaacgtttcactgcagggactttcagtgaccacatggcactt
ctccgagcattccaggcatggcagaaagctcgaagtgatgggtgggagcgagccttttgt
gaaaagaattttctttcacaagctactatggaaataatcataggcatgagaactcagttg
cttggtcaacttagagcatcaggttttgtgagagcacgaggtggtggtgacattcgagat
gttaacacaaattctgagaactgggctgtcgttaaagctgcattggttgcaggcatgtat
cctcatttagtccatgtggacagagagaatgtagtattgacagggccaaaggagaaaaaa
gtacgatttcatcccacttcagttctcagtcaacctcaatataaaaagattcctccagct
aatggtcaagctgcagcaattcaggcactgcccacagattggcttatttatgatgaaatg
accagagctcatagaatagctaatattagatgttgttcagcagtgacacctgtcactgta
ttgatattttgtggaccagctaggttggcaagtaatgctcttcaggaaccttcatctttt
cgagcagatggtattcctaatgacagtagtgatagtgaaatggaagacagaactactgct
aatttggcagctttaaaacttgatgagtggctcaatttcaaactagagccagaggcagcc
agtttattgctgcagcttagaaagaagtggcatagcttatttttacgccgaatgagagct
ccatccaaaccttggtctcaagttgatgaagctaccataagagcaattatagctgtttta
agcactgaagaacagtctgcaggtttacaacaaccatctgggattggccaaaggccaaga
cctatgtcttcagaagaacttcctttggcatcatcttggaggtcaaataatagtaggaaa
atttcagcagatactgaattttctgctgagtctactactgcagaaagagtattgatggaa
tctccatctccagcactgcacccacctcagaagtacaaagatagaggaattttacatcct
aaacgaagcactgatgacaggtcagatcagtcttctgtgaaatctacagacagcaatagt
tatccaagtccttgtgctagtccttcttctccatcctcaggaaagggctcaaaatctcct
tcaccaagaccaaacatgcctattcgatacttcataatgaagagtagcaatctgagaaac
cttgaaatttctcaacagaagggtatctggtctacaacccctagtaatgagcagaagcta
aaccgagccttttgggaaagcagcatggtttacttggtattttctgttcaaggatctgga
catttccagggattttctagaatgtcttctgagataggaagggagaagagtcaggactgg
ggttcagctggactaggaggagtgtttaaggtggagtggatacgaaaagaaagtcttccc
tttcagtttgcacaccatttactcaatccttggaatgacaacaagaaagtccagataagc
agagatgggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgc
ctttcattgggagaaaaaaccacaactgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (23)   
   Pfam (23)   
All databases (61)   

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