KEGG   Bordetella bronchiseptica 253: BN112_0101
Entry
BN112_0101        CDS       T02344                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bbh  Bordetella bronchiseptica 253
Pathway
bbh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BN112_0101 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbh03400]
    BN112_0101 (uvrB)
DNA repair and recombination proteins [BR:bbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BN112_0101 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BN112_0101 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 Kinesin DUF87 AAA_22 Microtub_bd
Other DBs
NCBI-ProteinID: CCJ52019
UniProt: A0A0C6P150
Position
83693..85720
AA seq 675 aa
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMAN
MIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRRE
VLARLVAMQYTRNDADFTRGVFRVRGETIDIFPAESPELALRLTLFDDEIESLELFDPLT
GRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMY
RGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQV
VRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVR
VRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKA
VRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARD
ALNALKSRLLLDGVG
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgaccgctcctggattcgtcgaattccccgatagcccgtttcacctctatcagccgtac
cctcccgcgggcgaccagccgggagcgatcgacgcgttgaccgagggcgtctcggacggc
ctgatgttccagacgctgctgggcgtgacgggctcgggcaagacctacaccatggccaac
atgatcgcccgcctgggccgtccggccctggtgcttgcgcccaacaagaccctggccgcc
cagctgtacgccgaaatgcgcgaattcttcccccgcaacgcggtggagtatttcgtgtcg
tactacgactattaccagcccgaagcctacgtgccgacccgcgacctcttcatcgagaag
gattcgtcgatcaacgagcacatcgagcagatgcgcctgtcggccaccaagagcctgctg
gagcgccgcgatacggtcatcgtgggcaccgtctcgtgcatctacggtatcggcaatccg
ggcgactaccatgccatggtcctgatcctgcgcaccggcgaccggatttcccggcgcgag
gtgctggcgcggctggtggccatgcagtacacccgcaacgacgcggacttcacgcgcggc
gtcttccgggtgcgcggcgagaccatcgacatcttcccggcggaaagccccgagctcgcg
ctgcgcctgacgctgttcgacgacgaaatcgagtcgctggagctgttcgatcccctgacc
gggcgcgtgaggcagaagctgccgcgctttacggtatacccgggctcgcactacgtgacg
ccgcgcgaaaccgtgctgcgcgcgatcgagaccatcaaggaagaactgcgcgagcggctg
gcccagctgatcgccgacggcaagctggtggaggcgcagcggctcgaacagcgcacccgc
ttcgatctggaaatgctgcaggagctgggcttttgcaagggcatcgagaactattcgcgg
cacttgtccggcgcggcgccgggcgagccgccgcccaccctgatcgattacctgccggcc
gacgcgctgatgttcatcgacgaaagccacgtcaccatcgggcagctcggcggcatgtac
cgtggcgaccgttcgcgcaaggaaaccctggtgcagtatggcttccggctgccgtcggcg
ctggacaaccggcccctgcgcctggaggagttcgaggcgcgcatgcgccagtgcgtgttc
gtgtcggccacgccggccgcctacgagcaggagcacgccgataacgtggtcgagcaggtg
gtgcggccgaccgggctggtcgatccgatcgtcgaggtgcgtccggcgcacacccaggtc
gacgacctgctgggcgagatccacaagcgggcggcgctgcaggagcgcgtgctggtcacg
acgctgaccaagcgcatggccgaggacctgaccgacttcctgtccgagcacggagtgcgg
gtgcgctacctgcattcggacatcgataccgtcgaacgggtggaaatcatccgcgacctg
cggctgggcgtcttcgacgtgctggtgggcatcaacctgctgcgcgagggcctggatatc
cccgaggtgtcgctggtggccatcctggatgccgacaaggaaggcttcctgcgatccgag
cgcagcctgatacagacgataggccgggccgcccgcaacctgaatggccgggccattctc
tacgccgaccgcataaccgactcgatgcggcgtgccatcgacgagaccgagcggcgcagg
gccaagcagatccagcacaacaccgaccacggcatcaccgcgcgcggggtcagcaaggcc
gtgcgcgaactgatcgatggggtggtggcgccggccggccatgacgcgctggaatccgcc
gtgcccgccgaggtgctgaccgacgagaaagccatggcgcgcgagatccggcgcctggaa
aagctgatgatggatcacgcccgcaacctggaattcgagcaggccgccgcggcacgcgat
gcgctcaacgctctcaagagtcggttgctgcttgatggcgtaggttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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