KEGG   Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo): BLIJ_1806
Entry
BLIJ_1806         CDS       T02092                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
blon  Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo)
Pathway
blon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:blon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BLIJ_1806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blon03400]
    BLIJ_1806
DNA repair and recombination proteins [BR:blon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BLIJ_1806
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BLIJ_1806
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 UB2H AAA_16 AAA_5 nSTAND3 AAA_28 DUF87 AAA_7 ZapA
Other DBs
NCBI-ProteinID: BAJ69386
UniProt: B7GSZ2
Position
complement(1918972..1921083)
AA seq 703 aa
MGFNIERVDKPFVVKSPYQPSGDQPKAIEELATRIENGENDVVLMGATGTGKTATTAWLI
ERLQRPTLIIEPNKTLAAQLCAEFRELMPDNAVSYFVSYYDYYQPEAYIPQTDTYIEKDS
NINDDVERLRHQATANLLTRRDCVVVATVSCIYGLGTPEEYAGRMLFLKEGQQINRDDLL
RRFVAMQYKRNDIAFTRGTFRVRGDTVEIIPVYEELAIRIEFFGDEIDRISTLHPLTGDV
IAHEPQVHIFPASHYVAGPERMERALKTIREELDGRLSELRKQGKELEAQRLDMRTTYDL
EMLTQVGVCSGVENYSRHLDGRAAGTPPHTLLDFFPDDFLLVIDESHVTVPQIGAMYEGD
ASRKRTLVEHGFRLPSAMDNRPLKWPEFLQRVGQTVYLSATPGDYELGLSDGVVEQIIRP
TGLLDPKIDVRPVKGQIDDLLAEIKARVARNERALVTTLTKKMAEDLTDYLLERGIKVEY
LHSDVDTLRRVELLRMLREGKIDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSYRSL
IQTIGRAARNVSGVVIMYADETTEAMRQAIDETDRRRAKQIAYNQEHGIDPKPLIKKISD
VNDMLAKEDVDTQTLLEGGYRNAGKAGNTHLGVPVLDPNEADKRHEEILKAGLPAQDLAD
LIRQLSEQMHTAAEQLQFELAARLRDEIRDLKKELRQMTEAGQ
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgggattcaacatcgaacgtgtggacaagccgtttgtggtcaaatcgccgtaccaacca
tccggagaccagccgaaggccatcgaggaactggccacgcgcatcgagaacggagagaac
gacgtggtgctcatgggcgccaccggcaccggcaaaaccgccaccaccgcatggctgatc
gaacggctgcaacgtcccacgctcatcatcgagccgaacaagacgctcgccgcgcagctg
tgcgccgaattccgcgagctcatgcccgacaacgcggtgagctatttcgtttcctactac
gactactatcagccggaggcctacataccgcagaccgacacctatatcgagaaagactcc
aacatcaacgacgatgtggaacgtttgcgccatcaggccacggccaacctgctgaccaga
cgcgactgcgtggtcgtggccaccgtctcctgcatctacggcctgggcactcctgaggaa
tacgccgggcgtatgctgtttctcaaggaaggccagcagatcaatcgcgacgacctgctg
cgccggttcgtggccatgcagtacaagcgcaacgacatcgccttcacccgcggcacgttc
cgcgtgcggggcgatacggtcgaaatcatccccgtatacgaggaactggccatccgcatc
gaattcttcggcgacgagatcgaccgcatctccaccctgcatccgctgaccggcgatgtg
atcgcccatgaaccgcaggtccatatcttcccggcctcccactatgtggccgggccggag
cgtatggaacgcgcgctcaaaaccatccgcgaggagcttgacggacggttgtccgaactg
cgcaaacagggcaaggaacttgaggcgcagcgtctcgacatgcgcaccacctatgacctg
gagatgctcacccaggtgggcgtgtgctcgggggtcgaaaactattcgcgtcatctcgac
ggccgcgcggccggcacgccgccgcatacgctgctcgacttctttccggatgatttcctg
ctggtcatcgatgagtcgcatgttaccgtgccgcagatcggcgcgatgtacgagggggac
gcctcccgcaagcgcacgttggtcgaacacgggttccgcctgccctccgcgatggataac
cgaccgctcaaatggccggagttcctgcagcgcgtcggccagaccgtgtatctgtccgcc
acgcccggcgactacgagttgggcttgtccgacggggtggtcgaacagatcatccgtccg
accggcctgctggacccgaagatcgacgtgcgcccggtcaaggggcagatcgacgatctg
ctcgccgagatcaaggcccgtgtggccaggaacgagcgcgcgctggtcaccaccctgacc
aagaagatggccgaggatttgaccgactatctgctggaacgcgggatcaaggtcgaatac
ctgcattccgatgtggatacgttgcggcgcgtcgaactgctgcgcatgttgcgcgaaggc
aagatcgatgtgattgtcggtatcaacctgctgcgtgagggcctcgatttgccggaagta
tcactggtggcgatcctcgacgccgacaaggagggcttcctgcggtcctaccgttcgctc
atccagaccatcggccgtgccgcgcgaaacgtgtccggcgtggtgatcatgtacgccgac
gagaccaccgaagccatgagacaggcgatcgacgagaccgaccgccgccgcgccaagcag
atcgcctacaaccaggagcatggcatcgatcccaagcccctgatcaagaagatcagcgac
gtcaacgacatgctcgccaaggaggatgtggacacccagaccttgcttgaaggtggctac
cgcaacgcgggcaaggccggcaacacacacctgggcgtgccggtactcgatcccaacgag
gcggacaagcgccacgaggagatcctgaaggccggcctgcccgcgcaggacctcgccgac
ctgattcgccagctgagcgaacagatgcacaccgccgccgagcagctccagttcgagctt
gcggcccgtctgcgcgacgagatccgtgatctcaagaaggagctccggcagatgaccgag
gcggggcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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