KEGG   Bos mutus (wild yak): 102281104
Entry
102281104         CDS       T02919                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
bom  Bos mutus (wild yak)
Pathway
bom03030  DNA replication
bom03410  Base excision repair
bom03420  Nucleotide excision repair
bom03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102281104 (RFC5)
   03410 Base excision repair
    102281104 (RFC5)
   03420 Nucleotide excision repair
    102281104 (RFC5)
   03430 Mismatch repair
    102281104 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bom03032]
    102281104 (RFC5)
   03036 Chromosome and associated proteins [BR:bom03036]
    102281104 (RFC5)
   03400 DNA repair and recombination proteins [BR:bom03400]
    102281104 (RFC5)
DNA replication proteins [BR:bom03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102281104 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102281104 (RFC5)
Chromosome and associated proteins [BR:bom03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102281104 (RFC5)
DNA repair and recombination proteins [BR:bom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102281104 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102281104 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N DEAD DUF815 AAA_14 ResIII AAA_5 DNA_pol3_delta AAA_19 ATPase_2 PhoH TniB TIP49 AAA_30 AAA_7 nSTAND3 T2SSE IstB_IS21 bpMoxR Mg_chelatase Thioredoxin_6 AAA_25 AAA_3
Other DBs
NCBI-GeneID: 102281104
NCBI-ProteinID: XP_005888369
Position
Un
AA seq 339 aa
METSARKQQQPDAAKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPEL
MVPRLEHVVEEEKVDISEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGH
PLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHL
LTKMADIEYRLAVGTSEKIQLSSLIAAFQVTRDLIVTEA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggagacctcagcgcgcaagcagcagcagcctgatgcggccaagatcagaaacctgccc
tgggttgaaaaatatcggccacagacactggatgatctcatttctcatcaggacatcttg
agtactattcagaagtttatcagtgaggaccgcctgccgcacctccttctgtatggtcct
ccagggacaggaaagacatccaccatcctggcctgtgctaaacagctgtacaaagataag
gaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatatcgtt
cggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaaactg
gtgatcttggatgaggccgatgccatgactcaggatgcccagaacgccctgaggagagtg
attgagaagtttactgaaaataccagattttgcctcatatgtaactatctgtcaaagatc
atccctgccttgcagtcccggtgtacaagattccgattcggaccactgactcccgaactc
atggttccccgcctggaacacgtcgtagaagaagagaaagttgatataagtgaagatggg
atgaaagcgctcataactctttccagtggagacatgcgaagggctctgaacatcttacag
agcaccaacatggcctttgggaaggtcacagaggagactgtctacacctgcacagggcac
ccgctcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcaccacg
gcctacaggaatatcatggagttaaaaactctgaaggggttggcgttacacgacatcctg
acagagatacacctgttcgtgcacagagttgactttccatcttcagttcgaatacattta
ttgaccaaaatggcagacattgagtacagacttgctgttggcaccagtgagaagattcag
ctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcactgaggcctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (31)   
   Pfam (31)   
All databases (48)   

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