KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_15230
Entry
WQG_15230         CDS       T02504                                 
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bto  Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    WQG_15230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bto03400]
    WQG_15230
Enzymes [BR:bto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     WQG_15230
DNA repair and recombination proteins [BR:bto03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     WQG_15230
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Helicase_RecD AAA_11 RecD_N Viral_helicase1 UvrD-helicase AAA_22 SH3_13 DEAD PIF1 SLFN-g3_helicase nSTAND3 AAA AAA_16 DUF87 PhoH Zeta_toxin UvrD_C T2SSE
Other DBs
NCBI-ProteinID: AGH38800
Position
1685592..1687550
AA seq 652 aa
MLKLLAELKQENLISELNYQFAKWIDNKQQAYDYSPTQQNLTLFLAALLSFHVMQGHSCL
RLNSSIIENPFGLKNYQYKRDYFNEILQKIERIPALEWQSYLAEHIAFSDNPEHVAPMLF
QHNRLYFYRYWQAEHRIARKMQQTVQTHTPDSAENSLNQAILAQFFIHQSAKIDWQKVAV
ATALAKKFCLISGGPGTGKTYTVAILLAALQLKQLKLGLAPLNIALAAPTGKAAARLKES
ITHSLLSLVQIPDELKQLLPNSAKTLHSLLGIRPNRDLPHYNADNPLHVDLLVVDEASMI
DLFVMEKLFNALKPTTRLILLGDKDQLASVEAGNAMSELGELLPLGYSKQHCDYLQCVTG
YELFSSNSQVPTVCDSLCHLRESRRFSEYSGIGYLAAQINAKQAGNSWQSFANSAFSDLQ
LITYPAMINAPEKTQWQQQCVKLVVQQAVQLYRPYLSLVKQRQQSPASISVAQIFAAFSQ
VRFLSALRVSELGVENLNQEIAEALRQCHLIEFNQSRESYIGKPILITENAAQLHIFSGD
IGLMLPDEQGKLRIYFDTNENGQYLNISPSRVPNYEPAYVMTVHKSQGSEFAHTLMVMPH
SHSPVLSKELLYTAVTRAKEKFTLFASERIWKNAVRTDIQRQSGLREQILAN
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgctcaaactacttgccgaactcaaacaagagaacctaatttctgaacttaattatcaa
tttgccaaatggattgataacaaacaacaagcttacgactactctcccactcagcaaaac
ttaacgttattcttagccgcattactttcttttcatgtgatgcaaggacatagttgcctt
cgcctcaattcaagcataattgaaaacccttttgggctaaagaattaccaatacaagcgg
gactatttcaacgaaattttgcaaaaaattgaacgaatcccagcgcttgaatggcaatct
tacttagctgaacatatcgcatttagcgataatcctgagcatgttgccccgatgctgttc
cagcataatcgactctatttctaccgctattggcaagcagaacaccgaattgctcggaaa
atgcaacaaactgtgcaaacacatactccagacagcgcagagaacagcttaaatcaagcg
attctggctcaattttttattcaccaatccgcaaaaattgattggcaaaaagtggccgtt
gccacagcattagccaaaaaattctgcttaatttcaggtggtcctggtacaggaaaaacc
tataccgtagcaatcttgctagcggcattacaacttaaacagctcaaattaggtctagcg
ccacttaatattgccctcgctgcgccaacaggcaaagcagcagcacgtttaaaagaatcc
attacgcatagtttgctgtcattagttcaaattccagatgaattaaaacaacttctacca
aacagtgccaaaacactgcatagtttattaggtattcgaccaaaccgtgatttaccacac
tataacgcggataacccactgcatgttgatctattagtggttgatgaagcctcgatgatt
gatctcttcgtcatggaaaaactatttaacgccttaaagcccacaactcgcctgatcctc
ttaggcgataaagatcagcttgcctctgttgaagccggcaatgcaatgagcgaattaggc
gaattacttccccttggctatagcaaacagcattgtgattatctgcaatgtgtaacaggc
tatgagctattttccagcaatagccaagtacccacagtatgcgacagcctatgtcactta
cgagaaagtcgtcgttttagcgaatattctggtataggctatcttgccgcccaaattaat
gccaaacaagcgggcaattcttggcaaagttttgcaaatagtgcttttagcgatctgcaa
ctcattacctatcctgctatgataaacgccccagaaaagacacaatggcaacagcagtgt
gtaaaactcgtggtgcaacaggccgtgcaactttatcgtccttatcttagtttggtcaaa
caacgtcagcaatcaccggctagcattagcgtggcgcaaatttttgcagcattctcacaa
gtgcgcttcttatctgcattacgcgttagcgaactgggcgttgagaacttaaatcaagag
atagccgaagctctgcggcaatgccatttaatcgaatttaaccaaagccgtgaaagctat
attggtaaaccgattttgatcacggaaaatgcggctcaattacatatttttagcggcgat
atcggcttaatgttaccagatgagcaaggcaaacttcgcatctatttcgataccaacgaa
aatgggcaatatcttaatatttccccaagtcgagtgcctaattatgaaccggcttatgtg
atgactgtccataaatctcaaggttctgaatttgcacatacattaatggtgatgcctcac
agtcactcccctgtattgagcaaagagctgctttataccgcagtcactcgtgcaaaagaa
aaatttacgctgtttgcgagtgagcgcatttggaaaaatgcagtaagaacggatattcaa
cgccaaagtgggctacgcgaacaaattctcgcaaactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (38)   

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