KEGG   Ciona intestinalis (yellow sea squirt): 100184785
Entry
100184785         CDS       T01056                                 
Name
(RefSeq) nidogen-2-like
  KO
K06826  nidogen (entactin)
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100184785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cin04990]
    100184785
Domain-containing proteins not elsewhere classified [BR:cin04990]
 EGF-like domain-containing proteins
  cEGF domain-containing proteins
   100184785
SSDB
Motif
Pfam: G2F NIDO Thyroglobulin_1 Ldl_recept_b EGF_3 EGF_CA EGF FXa_inhibition cEGF hEGF SGL EGF_MSP1_1 Plasmod_Pvs28
Other DBs
NCBI-GeneID: 100184785
NCBI-ProteinID: XP_002125504
Ensembl: ENSCING00000022078
Position
11:complement(1486754..1499012)
AA seq 1293 aa
MKSIYRTAFLLASIAVAHAITTEDLYPFQTTEDRIIQRGDTLSSKKVDLIIPAKFYDTEY
SSLWVNTDGFISFETDSSDVSNDDFPFKEALLAPYMANLDTTHVGAVYYQEHMSSDILSR
ATADVRRAFPVAAATFTAESVFVVTWYQVEGRSLEGDVATFTFQAILVSNGVDTYAIFLY
PQKGMAVLREGARPKSTVFKARAGFNQGNDDRYLEMYPVDSLIDFRNTWNNGEWIFQVGG
DGVRRSRDVVPPELVRNVRQAGSIINVQDINLGGESPNYEDVSISNPQTHDYCARDPNAC
TAENSVCVNHDNGYCCKCQSTTYGNGKVCLVKDEPIRVNGNVTGTVDVRSSDGRINRVSV
SNVDFHSYVITNQGRAYTAISDVSPMLGSALQPISAIGDIIGWLFAVTDDSTVNGFQYTG
GSLQRRVSLTFSNSDYRFDMRQRFVGVTQMDGENVVVAHTNFVGSLPQIDADAELTMADY
TETYVKEAPGRISSSATRSYKVNNVTHTYDVSQTIIYSECQSALSNVPVNLQLEVTGNFL
GYNANEEIVRYAMNNRVTSSGTGGGGSQAVHPCDNGNHDCHPNAQCEPRGGLEFSCRCAR
GFAGDGYVCDDFDECVSRPCAYGALCSNSIGSYSCECPPGQALNEDATECISVETTRDPC
ETPGLCLGGRCMSLGDTYRCICPDGYYFGQDGCRDLDECRENRHNCAVNAECMNNDGSFA
CICNPGYNGDGVTCQENIVIPPTTHRTACQAQYDEVEEYIRTHSNLQDGPEHPTCMPDGT
FAPRQCNGFTQVCWCVDPDSGDAIPGTMTQPDQGYLLDCTVPIEQPERPPDDLTLCQADR
WEAEQSKSRVTATGETVFSPLCTAAGAYEPLQFHTEGYFTCVDFNGVEVSRHESQVDCLT
QCKLEEYYAETDNLFAGTSKFVPQCDENGGFSPVQCDSASRTCYCVGQNGQEIPNTKITT
DNPESITADRLECDRFNPSRVTTNAAAQLIYAQGMGVNSILLPVTADSSSRTLHSRYGRT
AIGVAVDCANQNFYWTDAAGRSIFMAPISDPNSKRSFARTGIRSPEGIAVDFISGNVFWT
DSGLDRIQVAKADGSNRAVLVSSGLVNPRGIAVDPFGGKMYWADWNRADPKIMVANMDGT
NAEVLIREGLKLPNDITIDQFYRKLCLIDAGTKKIECMNLDGTQRSVMYDISRESGGTQE
PFGLAVDGSMLYYTDRRGERVYAINTLNGERFSVVGPVGSHGNMYGISVVHSQCASGYNA
CSINNGGCAHLCIPIPNGRTCKCPANVPDCVEQ
NT seq 3882 nt   +upstreamnt  +downstreamnt
atgaagtcgatctacaggacagcgtttctgcttgcaagtatcgctgtagcgcatgcaatt
acaacagaggatttgtacccgtttcaaactactgaagaccgcattatacagagaggggac
acattatcgtcgaaaaaagttgacttgattattcctgccaagttttacgatacggaatat
agttctttgtgggtgaacacggacggatttatctcatttgaaactgactcatcggacgtc
agcaacgatgacttcccatttaaagaagcattgctcgctccttacatggcgaacttggac
accacccatgttggagctgtgtattaccaagaacacatgagcagcgacattttgtcccgg
gccactgccgacgtccgcagagcattccctgtggcagctgcgacgttcactgccgaatct
gtttttgttgtgacttggtaccaagttgaaggacggtcgctggagggcgatgttgccaca
ttcacatttcaagcaatattggtgtcgaacggcgtggacacatacgctatatttctctat
ccacaaaagggtatggctgtattgcgtgagggcgctcgaccaaaatcaactgtttttaaa
gcaagagctggattcaatcagggcaacgatgatcgatatttggaaatgtatccagtggac
agtctaatcgatttcagaaacacttggaacaacggtgaatggattttccaagtcgggggt
gacggggttcgtagatcacgtgacgtggttccgcctgagttggtacgtaacgttcgtcaa
gcaggcagcattatcaacgtacaggatattaacctcggaggcgaatcgccaaactatgaa
gacgtttccatctccaacccacaaacccatgattattgcgcaagagaccccaacgcatgt
acagcagaaaactcggtttgcgtgaaccacgataacgggtattgctgtaaatgtcaaagt
accacttacggaaacggaaaagtgtgtttggtgaaagacgaaccaatccgtgtgaacggt
aacgttactggtacagttgatgtgaggtcttctgatggacgaatcaatcgggtgtcagtt
tcaaacgtggatttccactcttatgttataaccaaccagggccgagcttatactgctata
agcgacgtttccccgatgcttggcagtgccttgcaacctatttcagccattggagatatc
attggatggctgttcgccgttacagacgattcgacagtaaatggcttccaatacaccggt
ggcagcctacaaagaagggtatcactcactttttcgaatagtgactacagatttgatatg
cgacagcgtttcgttggtgttacacaaatggacggtgagaacgtagtggttgcgcacacc
aacttcgttggatcacttccgcaaattgacgctgatgccgaacttactatggccgattac
actgaaacttacgttaaagaagcgccaggacgaatttcgagctctgctacaaggtcttac
aaagtgaacaatgttacacacacttacgatgtatctcagactattatctacagtgagtgc
caatctgcactttcaaatgtgcctgtaaaccttcaacttgaagtgacgggaaacttcctt
ggttacaacgccaatgaagaaattgttcgatatgccatgaataaccgtgtaacatcatcc
ggaactggcggtggtggttcgcaggctgtacacccgtgtgataacgggaatcatgattgt
catccgaatgcccagtgtgagcctcgtggcggtttggagttttcttgccggtgtgcgaga
ggtttcgccggtgacggttacgtttgtgacgatttcgacgaatgcgtgtcacgcccgtgt
gcttacggcgcattgtgctctaactcaatcggttcttattcctgtgaatgtcctcctgga
caggcactgaatgaagacgcaacagaatgtataagtgtagaaacgacaagagatccatgt
gaaacaccaggtctatgtctgggtggaaggtgcatgagtcttggtgatacatacagatgt
atctgccctgatggttactactttggccaagatggttgcagagatttggacgaatgtcgt
gaaaatcgtcacaactgtgcggtgaacgctgaatgtatgaacaatgatggaagctttgct
tgtatttgcaacccagggtataatggagatggtgttacttgtcaagaaaacatagtcata
ccaccaactacacatcgaactgcctgccaagcacaatatgatgaggtggaggaatatatc
cgaacacattcaaacttacaagatggaccagagcacccaacatgcatgcctgatggtact
tttgccccacgacagtgtaatggtttcacgcaagtctgctggtgtgttgatcctgatagt
ggagatgcgattccagggaccatgacgcaacctgatcaaggttatcttcttgattgcaca
gttccaattgagcaaccagaaaggccaccagatgatctgactttgtgccaagctgataga
tgggaagctgaacagagcaaatcaagagttacagctacaggggagacagtgttctctcca
ctttgtacggctgctggggcttacgaaccactacagttccacactgaaggatatttcact
tgtgtagattttaatggagttgaggtttcccgtcatgaaagccaagttgactgtttgact
cagtgcaaattggaagagtattatgctgaaactgacaatctgtttgctggaacttccaag
tttgtcccacaatgtgatgaaaatggtggatttagccctgtacagtgcgattctgcttca
cgaacatgttactgtgttggacaaaatggacaagaaattccaaacacaaaaataacaaca
gataacccagaatcaattacagctgacagattagaatgcgacagattcaatccatcacgc
gttacaacaaatgctgcagctcagcttatttacgctcaaggcatgggagtgaattctatt
ctgctgcctgtgactgctgacagttcatcccggactcttcattcaagatatggtagaacc
gccattggggtggcagtggactgcgcaaaccagaacttttattggacagacgcagctggt
agaagcatattcatggcaccaatcagcgatccaaactctaagcgcagttttgcccgtact
ggaatcagaagtcctgaaggaatcgccgtcgatttcatttctggcaatgtgttttggacg
gattctggattggatcgaattcaagttgccaaagctgatgggtctaaccgggctgttctg
gtttcatctggtttggtcaacccaaggggaattgctgttgatccatttggagggaaaatg
tactgggctgattggaaccgtgctgaccctaaaatcatggtagccaacatggatggtacg
aatgctgaagtattgatacgtgaaggattgaaactgccgaatgacatcactattgatcaa
ttctacagaaaactttgcttaatcgacgcaggaactaagaaaattgaatgcatgaacttg
gatggaacccaacgttcagttatgtatgatattagtcgtgagtctggtggaacacaagaa
ccatttggacttgctgtagatggttccatgctctactacacagatagaagaggtgaaaga
gtttatgcgataaacacattgaatggagaaagattcagtgtggttggaccagtaggatcc
catgggaatatgtatggaatatctgttgtgcattctcaatgtgctagtggatacaacgca
tgcagcataaacaacggtgggtgcgcacatttgtgtattccaattccaaacggcagaacg
tgtaaatgccccgccaacgtgcccgactgcgtagagcaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (182)   
   KEGG ORTHOLOGY (1)   
   RefGene (177)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (201)   

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