KEGG   Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c20380
Entry
Cst_c20380        CDS       T02440                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
css  Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:css00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cst_c20380 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:css03400]
    Cst_c20380 (uvrB)
DNA repair and recombination proteins [BR:css03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cst_c20380 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Cst_c20380 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_22 AAA_30 UB2H AAA_16 Kinesin SWI2_SNF2 AAA_7 LcrG DUF87 AAA_5 MICSWaP Bestrophin
Other DBs
NCBI-ProteinID: AGC69011
UniProt: L7VRJ8
Position
complement(2215410..2217389)
AA seq 659 aa
MPEFRIKSNYKPSGDQPQAIERLVESVQKGNKHQTLLGVTGSGKTFTIANVIERLQRPTL
VIAHNKTLAAQLCSEFREFFPDNAVEYFVSYYDYYQPEAYVPATDTYIEKESSINDEIDN
LRHAATAALFERRDVIIVASVSCIYGLGDPEDYTELMLSLRPGMQKDRDEVIKKLVDMQY
TRNEIDFKRGTFRVKGDVLDIYPASSSGTIIRVEFFGDEVDRITEVDPLTGEIIGTRTYI
AIFPASHYATTKEKMERAIKSIEQELEERLKYFRENNKLLEAQRLEQRTRYDIEMMREIG
FCPGIENYSRHISGRAPGSPPYTLLDYFPKDFLVVIDESHVTVPQIGAMYNGDRSRKETL
VEYGFRLPSAFDNRPLTFEEFERKVNQVIYVSATPGEYERKNSAVIVEQIIRPTGLVDPE
VVVKPVKGQVDDLMEEIRIRVERNERVLVTTLTKRMAEDLTQYLADAGIKVRYLHSDIDA
IERMQIIRDLRLGVFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNVNGKVIMYADYVTGAMERAINETNRRRQIQMEYNRKMGITPRTVQKNIHDTLETLKA
AETEKEYAADYKEMPTEKLIEKLTAEMKAAAKELEFEKAAMLRDRINELRKKLQEQETG
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgcccgaatttaggatcaaatccaattacaaaccttccggggatcagccccaggccata
gagagactggttgagtcggtacaaaaaggaaacaagcaccagaccctccttggtgtcaca
ggttcgggaaaaacgtttacaatagccaacgtgatagaaagactgcaaaggccgactttg
gtgattgcgcataacaaaacacttgccgcgcagttatgttccgagttccgcgaatttttt
cccgacaatgccgtggaatattttgtgagctactacgattactatcagcccgaggcttat
gttcccgccaccgatacctatattgaaaaggaatcatcgataaatgatgaaattgacaat
ttgcggcacgccgccaccgccgctttgtttgaaaggcgggatgttataattgttgcaagc
gtgtcgtgcatttacggcctcggtgatcctgaagactacactgaactgatgctgtcatta
aggccgggcatgcagaaagacagggatgaagtgataaagaaactggtagacatgcagtat
acacggaatgaaattgattttaagagaggtacgttcagggtcaagggggatgttctggac
atttatccggcatcatcttcaggaactattatcagggttgaatttttcggggacgaggtg
gacagaataaccgaggttgatcctctgacgggtgaaataataggaactcgcacttatatc
gcgatatttcccgcatcccattatgcaacgacgaaagagaaaatggaaagggccattaaa
tcgatcgaacaggagctggaagaaagactgaaatatttcagggaaaataacaagctcctc
gaagcgcagaggctggaacagagaacaagatacgatattgaaatgatgcgtgaaataggc
ttttgtccgggaatagagaactattcaagacacatcagcggcagggctccgggaagtccg
ccgtataccctgcttgattatttcccgaaagatttccttgtggtcattgacgaatcccat
gtaacggttccgcagattggcgcaatgtacaacggggacaggtcaaggaaagaaaccctt
gttgaatacggctttcgccttccttcggcgtttgacaacagacctcttacttttgaggaa
tttgagcggaaggtaaatcaggttatttatgtaagtgcaacgcccggggaatatgaaagg
aaaaattcggcggtaattgttgagcagattatcaggcctaccggactggttgatccggaa
gtggttgttaaacccgtaaagggtcaggtggacgatcttatggaagaaatacggatccgg
gttgaacgtaacgagcgggttctggttaccacgcttacaaaacgaatggccgaagacctg
acccaatatcttgccgatgccgggattaaggtacggtatctgcattcggatattgatgcg
attgagagaatgcaaataataagggatttaagacttggggtgtttgatgttctggtgggc
ataaaccttctcagagaaggccttgacttgcctgaagtttcactggtagcgatacttgac
gccgacaaggaaggttttctgcgttccgaaacttctctgatacagactatcggcagggct
gcgcggaatgtgaacgggaaggttataatgtacgccgattatgtgacgggtgccatggag
agggcaatcaacgaaaccaacaggcgaaggcaaattcagatggaatataacagaaagatg
ggaattacgccgagaacggttcagaaaaacattcatgacacccttgagacgctgaaggca
gccgaaaccgaaaaggaatacgccgctgattataaagaaatgccaacagagaaactgata
gagaaactcaccgctgaaatgaaggctgctgctaaggagctggaattcgaaaaagcggca
atgctgcgcgataggattaatgaattaaggaagaaacttcaggaacaggaaacgggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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