KEGG   Acetivibrio thermocellus ATCC 27405: Cthe_2249
Entry
Cthe_2249         CDS       T00474                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cth  Acetivibrio thermocellus ATCC 27405
Pathway
cth03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Cthe_2249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cth03400]
    Cthe_2249
Enzymes [BR:cth01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Cthe_2249
DNA repair and recombination proteins [BR:cth03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Cthe_2249
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 HHH_5 PIF1 nSTAND3 AAA_22 UvrD-helicase NTPase_1 Helicase_RecD SLFN-g3_helicase UvrD_C DEAD ATPase_2 AAA T2SSE AAA_28 AAA_16 HHH_2 AAA_29 PhoH MeaB MobB RsgA_GTPase bpMoxR KAP_NTPase Ole_e_6 ABC_tran cobW AAA_12 TsaE AAA_5 NB-ARC AAA_18 AAA_7 NACHT Mg_chelatase ResIII AAA_14 AAA_24 ATP_bind_1
Other DBs
NCBI-ProteinID: ABN53451
UniProt: A3DHM2
Position
complement(2675408..2677648)
AA seq 746 aa
MDNLVTIEGTVEEIIFSNEANGYTVCEIKCDKEVITVVGYMPFINVGETLRVSGKWVIHP
DYGEQLKVELYEKLLPETPEAIERYLASGLIKGVGPATAKKIVKKFADQTLHIISHHPQR
LAEIKGITMEKALRIGQAFEEQRGLRDVVLFLQEYGISPTYCAKIYKTFGPDTIEEIRKN
PYRLSDEIFGISFRTADRIAKSLGIDPYSKYRISSGIKYVLSRAATEGHTFLEEEMLKSY
TSKLLDINIDSIEDALVSLVLNKSVYVDRNDGMSKIYLSSFYHAELGVCRKLVELSQVRY
SADMEDFEERIKQVQKKEGIILADKQKEAIREAMTNGVLVITGGPGTGKTTIIKSIISLL
ESEGYEFALAAPTGRAAKRMSEATGYEAKTIHRLLEIGYTSNEDELVFMRTEDNPIEADV
VIIDEMSMVDIILMYHLLKAIVCGTRLILVGDVDQLPSVGPGNVLRDIIKSGMIKTVKLS
EIFRQAGESMIVVNAHRINRGEHPILNEREKDFFFVTRNSQNDILKTVVDLCTRRIPDTY
GYDPMKQIQVLSPMRKGTVGVANLNIELQKVLNPEDGKKKQKAFRNYVFREGDRVMQIKN
NYNLRWEKINGPGQEGAGVFNGDMGIIVEIDDEEQKIKVLFDDEKLVEYDYTILDELEPA
YAVTIHKSQGSEFPVVILPVFPGPSVLMTRNLLYTAITRARELVILVGNKDCLYGMIMND
RETKRNSDLAEKLRKCIVGVDWLKQW
NT seq 2241 nt   +upstreamnt  +downstreamnt
gtggataatttggtaactattgaaggtactgttgaagaaattatattctccaatgaagcc
aatggatataccgtttgtgagataaaatgcgataaagaagttattaccgtcgtgggatat
atgccttttatcaatgtgggtgagacgctgagagtttcggggaagtgggtcatccaccct
gactatggcgagcagctcaaagtggagctgtatgaaaagctgcttccggaaacgccggag
gctatagaaaggtatcttgcgtcagggcttatcaagggagtcggccctgcaaccgcaaaa
aagattgtaaagaaattcgcagaccaaactcttcatattataagtcatcacccgcagagg
cttgccgagataaaaggtattaccatggaaaaggctttgagaataggacaggcctttgag
gagcaaagaggccttcgggatgttgtgctgtttctgcaggagtatggcataagtccgact
tattgtgccaaaatatacaagactttcggaccggataccatagaagaaatcaggaaaaac
ccttaccggctttcagacgagattttcggaataagtttcagaacggctgaccggatagcc
aaaagccttggaatagacccttactcaaaatacaggatttcaagcggtatcaaatatgtg
ttaagccgggccgcgacagaaggtcatacttttttggaagaagagatgctaaaaagttat
acgtcaaaacttttggacatcaacattgacagcattgaagacgctctcgtttcccttgtg
ctgaataagtcggtgtatgtggacagaaatgacgggatgtcaaagatatatttgagttca
ttttaccatgcggagctgggagtatgcagaaagctggtggaactttcccaggtaaggtat
agcgccgatatggaggactttgaggaaaggataaagcaggttcagaaaaaagagggtata
atacttgcggacaagcaaaaggaagccatcagggaagcaatgactaacggcgtgcttgtc
ataaccggagggccgggcacaggcaagacaaccataatcaaaagcattataagccttctt
gaaagtgaaggatatgagtttgcccttgcagctcccaccggcagggcggcaaagaggatg
tccgaggctacgggctatgaggcaaaaaccattcacaggctccttgagattggttatacc
tcaaatgaggacgagcttgtgtttatgaggacggaagacaatcccatagaggctgatgtg
gtgataattgacgagatgtccatggtggatataattctcatgtaccacctgcttaaagct
attgtctgcggaacaaggcttatactggtcggagatgtggatcagcttccttcggtgggg
ccgggaaatgtcctcagggatataataaaaagtgggatgatcaagaccgtaaagttgtct
gaaatattccggcaggccggagagagtatgatagttgtcaatgcccacaggataaaccgc
ggagagcatcctatattaaatgagagggaaaaagattttttctttgtgacaagaaattcc
cagaatgatattttaaaaaccgtggttgatctttgtacaagaagaatacccgatacttac
ggatatgatcccatgaaacagatacaggtattgtcgcctatgagaaagggtacggtggga
gtggcaaacctcaatattgagcttcagaaggttttaaatcccgaagacggaaaaaagaaa
caaaaagccttcagaaactatgtattccgtgagggagaccgggtgatgcagataaaaaac
aactacaacctcagatgggaaaaaatcaacggcccgggccaggaaggagcgggtgtgttt
aacggcgatatgggaattatagttgaaatagatgatgaagagcaaaaaataaaggttttg
tttgacgatgaaaagcttgtggaatatgattacactattttggacgagcttgagccggcc
tatgccgttaccattcacaaaagccagggaagtgagtttcccgtggtgatacttccggtg
tttcccgggccttcggtgcttatgaccagaaatcttttgtacactgcgataacaagggcg
agggagctggtgatactggtgggcaataaagattgtctttacgggatgattatgaacgat
cgggagaccaaaagaaactcggatttggctgaaaaacttagaaaatgcatagtgggagtg
gactggttgaaacaatggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (185)   
   KEGG ORTHOLOGY (1)   
   RefGene (182)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (45)   
   Pfam (45)   
All databases (237)   

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