KEGG   Dehalobacter sp. DCA: DHBDCA_p2844
Entry
DHBDCA_p2844      CDS       T02278                                 
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ded  Dehalobacter sp. DCA
Pathway
ded03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ded00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DHBDCA_p2844 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ded03400]
    DHBDCA_p2844 (uvrB)
DNA repair and recombination proteins [BR:ded03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DHBDCA_p2844 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DHBDCA_p2844 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD DUF87 AAA_30 UB2H Kinesin SWI2_SNF2 Microtub_bd
Other DBs
NCBI-ProteinID: AFV03871
Position
complement(2930242..2932293)
AA seq 683 aa
MEFRLRAPYSLSGDQPQAVDKLTEGVLAGKKHQTLLGVTGSGKTFTMASIIERIQKPTLV
FAHNKTLAGQLYCEFKEFFPENAVEYFVSYYDYYQPEAYVPSNDLYIEKDASINEEIEKL
RHSATAALFERRDVIVIASVSCIYGMGSPDEYRDMVLSLRQGQEIERNQMLRKLVEIQYD
RNDTAFYRGTFRVRGDVVEVCPASTDEKAVRIEMFGDEIEHLYEVNLLTGEILGERKHIS
IFPNSHYVTERDKLMLAAENIEQELEERLEYFRSREKLLEAQRLEQRTRYDIEMLREMEF
CNGIENYSRHLTFRKPGETPYTLLHFFPKDFLMFIDESHQTLPQVRGMFEGDRSRKSTLV
EHGFRLPSAMDNRPLRFSEFEIVVPQRVYVSATPGPYEMEHCREVVEQIIRPTGLIDPEI
IVRPTQGQIDDLIGEIRQRIARDERILVTTLTKRMSEDLTDYLKQLNINVRYLHSDIQTL
ERLEILRELRLGEIDVIVGINLLREGLDLPEVSLVVILDADKEGFLRSERSLIQTVGRAA
RNVNGKVIMYADNVTESMKAAIGETNRRRAIQEEYNRAHGIIPQTIRKQIYEVPEATKVA
EKKTAYGEKGGKLTPEEQEKTIQVLEEEMLKAARELDFERAADLRDAIIELKGEYAGMTR
SSRSKSGKNYSSEKQNRSRKKRR
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggaatttcgactgcgggctccttatagtctttctggagatcagccccaggcagtggac
aagcttactgaaggcgttctagccggtaaaaagcaccaaacgctgctgggtgttaccgga
tcgggtaaaacatttacaatggccagcatcattgaacgcattcaaaaaccgaccctggtc
tttgcacacaataagacgctggccggacagctgtattgcgagtttaaggaattttttccg
gagaatgcggttgaatattttgtcagttattatgattattatcagccggaagcttatgtt
ccatccaatgacctctacattgaaaaagacgcttcgatcaatgaggaaatagaaaaattg
cggcattcggccacagctgcgttgtttgaaagaagagacgtcattgttatcgcaagtgtt
tcctgtatctatggtatgggctctccggatgagtaccgggatatggttctgtctttgcgg
cagggccaggaaatagaacgcaatcagatgctgcgcaagctggttgaaatccagtacgac
cggaatgataccgccttttatcgcggaactttccgggtaagaggggatgtcgtcgaggta
tgtcctgcttctacggatgaaaaggcagtccggattgaaatgttcggcgatgaaatcgag
catctttatgaggtgaatcttctgaccggtgaaatcctgggagaacgaaaacatatctcg
atttttccaaactcccactatgtgaccgaacgtgataaattaatgctggcagctgaaaat
attgagcaggagcttgaagagcgcctggaatatttccgttccagggaaaagctgctggag
gctcagcgcctcgaacagagaacccgctacgatattgaaatgcttcgggagatggaattt
tgcaacggtattgaaaattattccaggcatcttaccttccgcaaaccaggagaaacaccc
tatactttgctgcactttttcccgaaggatttcctgatgttcattgatgaatcgcatcag
actctgccgcaggtcagaggtatgtttgagggagaccgttccaggaaaagcacgctggtg
gagcatggtttccgcctgccctctgccatggataaccggccgctgcgtttttctgaattt
gaaatagttgtaccccaaagggtctatgtcagtgcgactcccggaccatacgaaatggag
cactgccgcgaggttgtcgaacagattatccggcccacaggtctgattgacccggaaatc
attgtgaggcccacccagggacagattgatgacctgatcggcgagatccggcagcggatt
gccagggacgaaagaatcctcgtgaccacactgaccaagagaatgtccgaagacctgaca
gactatctgaaacagctgaatattaatgtcagatatcttcattctgatattcaaaccctt
gagaggctggaaatcttaagagaactccgtcttggagaaatagatgtgattgtcgggatt
aatcttttaagagaaggccttgatttgcctgaggtatcgctggtggtgatccttgatgct
gataaggaaggattcttaagatcggaaaggtctttgatccagactgtgggccgggcggcc
cgaaatgtcaacggaaaagtcatcatgtatgcggacaatgtgacggaatccatgaaagcc
gcgattggtgagaccaaccgtcgccgagcgatccaggaagaatataacagagcacacggg
attatcccgcagaccattcgcaagcagatctatgaagtgcctgaagcgacgaaagttgcg
gagaaaaagacggcttatggggaaaaaggcggcaagttaacacctgaggaacaggaaaaa
accattcaggtcctggaagaagagatgcttaaggctgccagggaactggattttgaacgc
gcagctgatttgagggatgcgatcattgaactgaagggagaatatgctggtatgacacgg
agcagccgctctaaatccggcaaaaactattcttccgagaaacagaacagatcccgcaaa
aaaagaaggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (33)   

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