KEGG   Enterobacter lignolyticus SCF1: Entcl_0911
Entry
Entcl_0911        CDS       T01342                                 
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
esc  Enterobacter lignolyticus SCF1
Pathway
esc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:esc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Entcl_0911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esc03400]
    Entcl_0911
Enzymes [BR:esc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Entcl_0911
DNA repair and recombination proteins [BR:esc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Entcl_0911
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 Helicase_RecD UvrD_C_2 Viral_helicase1 SH3_13 AAA_11 AAA_22 UvrD-helicase SLFN-g3_helicase nSTAND3 AAA_16 AAA_28 AAA_33 PhoH MukB CbiA T2SSE Flavi_DEAD TrwB_AAD_bind DO-GTPase1 DEAD ATPase
Other DBs
NCBI-ProteinID: ADO47183
UniProt: E3G534
Position
950524..952362
AA seq 612 aa
MALAALLMEAQQLKLLRPLDVQFALTVAHNDGPAVMLAAALLSHDAGEGHVCLPLSRLRP
EAWSGTKSPTLWPQLFALAGSEDERLRQLQASPAVSDGDTPAPMVLNEGRLYLNRMWRSE
QAIARFFNQPQPLPLADEATIAQVLADLFPASHEVDWQKVAAAVALTRRISVISGGPGTG
KTTTVARLLAALIRLSGDRRCRIRLAAPTGKAAARLTESLGAALRKLPLTEQQKAMLPTE
AGTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMARLIDALPPHARVIFLG
DRDQLASVEAGAVLGDVCAWVNDGYTHARALELSRLTGTPVPAGRGELAGQLRDSLCLLQ
KSYRFDESSGIGQLAKAVNEGRAEAMRAAFRHGFTDISLSALRTAPEYEAMLEDARAGYD
DYLQLLKAKAEPEAILAAFGHYQLLCALREGPYGVSGLNTQFEQLLARKRQIAMLRHSPW
YEGRPVMIARNDSALGLFNGDIGVALERGSGLRVWFPMPDGRIKSVQPSRLPEHDTAWAM
TVHKSQGSEFAHAALILPAQPTPLVTRELVYTAITRAKTRLSMYADEKLLAQAITVRTER
RSGLAALFGRQE
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggcgctggccgcattattgatggaagcgcagcagctgaagctgctgcgcccgcttgac
gtccagtttgcgctgaccgttgcgcacaacgacggtccggcggtgatgctggccgccgcg
ctgctcagccatgacgccggggaagggcacgtgtgcctgccgctgtcgcgcctgcgcccc
gaggcctggagcggtacgaaatcaccgacgctctggccgcagctgtttgcgctggcgggg
agcgaggatgagcggctgcgccagctgcaggcgtcgcctgcggtaagcgacggcgatacg
ccagcgccgatggtgctcaacgaggggcgcctgtacctcaaccgtatgtggcgcagcgaa
caggcgatcgcccgttttttcaatcagccccagccgctgccgctggcggatgaggcgacg
atagcgcaggtgctggcggatctgtttccggcaagccatgaggttgactggcagaaagtg
gcggcggcggtggcgctgacccggcgcatttcggtgatttccggcggcccgggaacgggt
aagaccaccaccgtcgccaggctgctggcggcgctgatccgtctgtccggcgatcggcga
tgccgtatccgccttgccgcgccaaccggcaaagcggcggcgcgcctgactgagtcgctc
ggcgcggcgctgcgcaaactgccgctgaccgaacagcaaaaagcgatgctgccgacggag
gcggggacgctgcaccgtctgctgggcgcccagcccggcagccagcgcatgcgctatcac
gcgggcaacccgctgcacctcgatgtgctggtggtcgatgaggcctccatgattgacctg
ccgatgatggcgcggctgattgacgcgctgccgccccatgcccgggttatctttcttggc
gatcgcgatcagctggcctccgtcgaagctggcgcggtgctgggcgacgtctgcgcctgg
gtgaacgacggttacacccatgcgcgcgcgctggagctcagccgtctgaccggaacgccg
gtgccggctggacgcggcgaactggccggtcagcttcgcgacagcctgtgcctgctgcaa
aaaagctaccgctttgacgaaagctccggtatcggccagctggcgaaagcggtgaatgag
gggcgcgctgaggcaatgcgcgctgcatttcggcacggatttaccgatatttcgctgagc
gccctgcgcaccgcgccggagtatgaggcgatgctggaagacgcgcgggcaggctatgac
gactacctgcagctgctgaaagcgaaggcggagccggaggcgattctggcggcgtttggt
cactatcagctgctgtgcgccctgcgcgaaggcccctatggcgtaagcggactcaatacc
cagtttgagcagctgctggcgcgaaaacggcagattgccatgctgcggcactcgccgtgg
tatgagggacggccggtcatgatcgcccgcaacgacagcgcgctggggttattcaacggc
gatattggcgtggcgctcgagcgcggcagcgggctgcgggtgtggtttccgatgccggac
ggccgcataaagtccgtgcagccgagccgcctgccggagcatgataccgcgtgggccatg
acggtgcataagtcccagggctcggagtttgcgcatgcggcgctgatcctgcccgcgcag
ccaacgccgctggtgacccgtgagctggtgtataccgccatcacgcgcgctaaaacgcgg
ctgtcgatgtacgcggatgaaaaactgctggcgcaggctatcaccgtgcgcaccgaacgg
cgcagcgggctggcggcgctgtttggccgtcaggaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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