KEGG   Francisella tularensis subsp. tularensis FSC198: FTF1393c
Entry
FTF1393c          CDS       T00381                                 
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ftf  Francisella tularensis subsp. tularensis FSC198
Pathway
ftf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ftf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FTF1393c (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ftf03400]
    FTF1393c (recD)
Enzymes [BR:ftf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FTF1393c (recD)
DNA repair and recombination proteins [BR:ftf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FTF1393c (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 Viral_helicase1 AAA_11 UvrD_C_2 Helicase_RecD UvrD-helicase SLFN-g3_helicase AAA_22 DEAD UvrD_C ResIII SH3_13 nSTAND3 NACHT PhoH Flavi_DEAD T2SSE TIP49 AAA_12 NTPase_1 SRP54 TrwB_AAD_bind AAA_28 Terminase_6N AAA_33 FtsK_SpoIIIE AAA_16
Other DBs
NCBI-ProteinID: CAL09409
Position
complement(1436770..1438638)
AA seq 622 aa
MLVYLMEMIMYKTFHKACEQLADIRAIDFFFAKEVFGLVKKTTPSMTTLSSESYPPFHGA
KGNDLEQKSNEILFHILMKLMHVYSHGHSCLKIADISNKTIFASEQSNQSDAKVGFKMPS
SDKIASILDNLNYDNLPIYFAKQYDSLYIKRLWNYENEIANFIKLKTIQNTQKDNRIEEV
VDKLFEPAGEINWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQMLNQNQQRIAL
LAPTGKAAQRMTESLKNTLATVIPSSLTTESTIQKNDIFKQVQDELNSVAQYLNNLEAQT
IHRFLGLRPNSTYVKYNQQSKAPFDVIIVDEASMLDMNIFIKLIRAVADNTKLILIGDTN
QLPSVEAGSLLANFTHDKYGSITPYTTLLIKNYRSQQYINNLAASVLKGDVNIDSQQNEN
IKFHSLRNLDIYLREYAKRYSQLEKCRDYKEALTELNKFRILVANKNLEIGTDKLNQKIE
KFMSKPIDSNYKGKLIMITQNSYSLGLFNGDVGIMWPDDTGKLRAYFDGKDAKAFSLNML
PKYESVYAMTIHKTQGSEFDEIVIILPAEDNEALSKQLLYTAITRAKYKLTIISEQSSLR
DIAQKDIKRNSNISELVSLSTQ
NT seq 1869 nt   +upstreamnt  +downstreamnt
ttgctagtttatttaatggagatgataatgtataaaactttccataaagcttgtgagcaa
ttagcagatattagagccatagattttttctttgctaaagaggtgtttggtttagtcaaa
aagactactccgtctatgaccactttatcaagtgagtcatatccaccctttcacggagca
aaggggaatgatttggaacaaaaaagtaatgaaattttatttcatattttgatgaagctt
atgcatgtgtatagtcatggtcatagctgtttgaagatagcagatatatcaaataaaact
atttttgcttcagagcaaagtaatcagagtgatgctaaagtaggctttaaaatgccaagc
tctgataaaattgcaagtattttagataacttaaattacgataatttacctatatatttt
gccaaacagtatgattctttgtatattaaaagattgtggaattatgaaaatgaaatagct
aactttataaaattaaaaacaatccaaaatactcaaaaagacaatcgtattgaagaagtt
gtagacaaactatttgaacctgctggtgaaatcaactggcaaaaacaggcggttatcaaa
agtctaaattataattttagtattatctcaggtggacctggtacaggtaagacaaccaca
gtcgcaaagcttttacttgctatacaaatgcttaatcaaaatcagcaaagaatagcgctt
ttagcaccaactggtaaggctgctcagagaatgacagagtcattaaaaaatactctagca
actgtcattccgtcaagcttgaccacagaatctactatacaaaaaaatgatatctttaaa
caagttcaggatgaacttaatagtgttgctcagtatcttaataatctagaagcacaaact
atacacagatttttaggcttaagaccaaactctacttatgttaaatataaccaacaatct
aaagctccattcgatgttattattgttgatgaagcttcgatgcttgatatgaatattttt
atcaagttaattagagctgtagcagataatactaagttgatattaataggtgatactaat
cagttaccatctgttgaggctgggagtcttttagcaaactttacacatgataaatatggt
agcattacgccatatacaacattacttatcaaaaactatcgttcacaacaatatataaat
aatcttgcagcctcagtcctaaaaggcgatgttaatattgatagtcaacaaaatgaaaat
attaaatttcatagtctaagaaatttagatatttatttaagagagtatgcaaagagatat
tcacagcttgaaaagtgccgtgactacaaagaggctcttacagagctgaataaatttaga
atacttgtggctaacaaaaacctagaaattggtacagataagttaaatcagaaaattgag
aagtttatgtctaagcctatagattctaactataagggtaaactaattatgataactcaa
aatagttattcattagggttatttaatggagatgtagggattatgtggcctgatgatact
ggtaagctccgagcatattttgatggtaaagatgctaaggcatttagtctaaatatgcta
ccaaaatatgaaagtgtttatgcgatgacaattcataaaactcaaggctcagagtttgat
gaaatcgtgattattcttccagcagaagataatgaagcgctaagtaaacaacttttgtat
acagctattactagagcaaaatataaattaacgattatatctgaacaaagtagcttaaga
gatattgctcagaaagatattaagagaaattcaaatatcagtgaattagttagcttgagc
actcaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

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