KEGG   Glycine max (soybean): 100805946
Entry
100805946         CDS       T01710                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
gmx  Glycine max (soybean)
Pathway
gmx04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100805946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100805946
   03009 Ribosome biogenesis [BR:gmx03009]
    100805946
   04131 Membrane trafficking [BR:gmx04131]
    100805946
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmx04147]
    100805946
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100805946
Ribosome biogenesis [BR:gmx03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    100805946
Membrane trafficking [BR:gmx04131]
 SNARE
  SNARE associated proteins
   Others
    100805946
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    100805946
Exosome [BR:gmx04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100805946
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_5 AAA_22 AAA_14 AAA_33 TIP49 NPHP3_N RNA_helicase AAA_17 nSTAND3 Mg_chelatase AAA_28 ATPase_2 AAA_lid_PRS2_C Parvo_NS1 AAA_18 IstB_IS21 ABC_tran Viral_helicase1 AAA_7 NACHT NB-ARC AAA_24 TsaE DUF815 Vps4_C Sigma54_activat Zeta_toxin Sigma54_activ_2 Zot Molydop_binding
Other DBs
NCBI-GeneID: 100805946
NCBI-ProteinID: XP_003538151
UniProt: K7LQC6
Position
11:16977788..16984692
AA seq 806 aa
MSHQAESSDSKSWKKDFSTAILERKKSPNRLVVDEAVNDDNSVVAMHPQTLEKLQLFRGD
TILIKGKKRKDTVCIALADDNCEESKIRMNKVVRSNLRVRLGDVVSVHACPDVKYGKRVH
ILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRGVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRVHTKNMKLSDNVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEVLNSMAVSNEHFHIALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSGGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDQESRYQI
FKACMKKSPVSKDVNLGALAEYTKGFSGADITEICQRACKYAIRENIEKDIEHERKRREN
PEAMDEDMEGEDVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSDFNFP
AAVSRTAGSEPFATSAGGADEDDLYS
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtctcaccaagccgaatcctccgactcgaaatcttggaagaaggatttttccactgcg
attcttgaacggaagaaatcgccgaatcggttagtcgtggacgaagcggttaacgatgac
aattcggtggttgccatgcaccctcaaacgttggaaaaactccaactttttcggggagac
accatcctcatcaaggggaagaaacggaaggacacggtttgcatagctcttgcagacgat
aattgtgaagaatcgaagataagaatgaataaagttgttaggtcgaatttgagggttcgt
cttggagatgttgtttctgtgcatgcgtgccctgatgtcaagtatgggaagcgcgtccac
attcttcccattgatgataccatcgaaggtgtcactggcaatctctttgatgcttacttg
aaaccatatttcttggaggcttatcgtcctgtcagaaagggggatttatttcttgtccga
ggaggaatgagaggagtagagttcaaagtcattgaaactgatcctggggagtattgtgtg
gttgctccagacactgaaatattctgtgagggggaacctgtgaaaagagaggacgaagaa
aggctagatgaggttggctatgatgatgtgggcggtgtcaggaagcaaatggcacagatt
cgtgagttggtagagcttccactgagacacccacaactttttaaatcaattggtgtgaaa
ccacccaaaggaattttgctgtatggacccccaggctctggtaagacattgatagctaga
gctgttgctaatgaaactggagcattcttcttttgtattaatggcccagaaattatgtct
aaactggctggagagagtgaaagtaatctcaggaaggcatttgaagaagctgaaaagaat
gctccctccatcatctttattgatgagattgattctattgcacccaagcgggagaagaca
catggtgaagtcgaaaggagaattgtttcacagcttttgactcttatggatggattgaaa
tctcgtgctcatgttattgttattggagctacaaatcgaccaaatagcattgaccctgca
ttgagaaggtttggtagatttgatagggaaattgatattggtgttcctgatgaagttgga
agacttgaagtccttcgcgtacataccaaaaacatgaagctttcagataatgttgatcta
gagagaattgcaaaagatactcatggatatgttggtgctgaccttgctgccctttgcact
gaagctgctctacaatgcatcagggagaagatggatgtcattgatttggaagatgagagt
attgatgctgaagtactgaattctatggcagtttcaaatgagcatttccatattgctttg
ggaacaagcaatccatctgctttacgagaaactgttgttgaggtgcctaatgtcagctgg
gaggatattggaggccttgagaatgtcaagcgtgagctgcaagagactgttcaatatcct
gtggagcacccagaaaaatttgagaagtttggtatgtcaccgtcaaaaggggttctcttc
tatggtcctccaggatgtggaaaaactttgttggccaaagcaattgctaatgaatgtcaa
gctaacttcatcagtgtgaagggcccagaattgctcactatgtggtttggtgaaagtgaa
gccaatgttcgagaaatttttgacaaggccagacaatcagctccatgtgtcctcttcttt
gatgagcttgactccattgctactcagagaggaagtagtggtggagatgctggtggagct
gctgatagagttctgaatcaacttctgactgaaatggatggcatgaacgccaaaaagact
gtgttcataattggggccaccaacagacctgatatcattgactcagcacttcttcggcct
ggtcgtctagatcaactgatctacattcctcttcctgatcaggagtcccgttatcaaatc
ttcaaggcctgcatgaaaaagtcacctgtctcaaaagatgttaatttgggagcactagct
gagtatactaaaggctttagcggtgctgatataactgagatatgccaaagagcatgcaaa
tatgctattagagaaaacatagaaaaggacatagagcatgagaggaagagaagagaaaac
cccgaggctatggatgaagacatggagggggaagatgtttcagagatcaaggcggctcat
tttgaagagtcaatgaagtatgcgcgtaggagtgttagtgatgctgatatacgcaaatac
caagcatttgctcagactttacagcaatccaggggctttggaagtgactttaattttcct
gcagctgtgagtaggaccgcaggatctgaaccctttgcaacttctgctggtggagctgat
gaagatgatctctatagttag

  All links  
Gene (28)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (37)   
   Pfam (37)   
All databases (70)   

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