KEGG   Candidatus Pantoea carbekii: HHS_07160
Entry
HHS_07160         CDS       T02865                                 
Symbol
msbA
Name
(GenBank) lipid transporter ATP-binding/permease protein
  KO
K11085  ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
Organism
hhs  Candidatus Pantoea carbekii
Pathway
hhs02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:hhs00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    HHS_07160 (msbA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hhs02000]
    HHS_07160 (msbA)
Enzymes [BR:hhs01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.6  ABC-type lipid A-core oligosaccharide transporter
     HHS_07160 (msbA)
Transporters [BR:hhs02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    HHS_07160 (msbA)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N DEAD Zeta_toxin RsgA_GTPase AAA_16 AAA_22 AAA_30 nSTAND3 AAA_25 MMR_HSR1 APS_kinase Sigma54_activat DUF87 AAA_5 MWFE AAA AAA_15 ABC_ATPase AAA_7 AAA_29 DUF5906 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: BAO00686
UniProt: U3U3E9
Position
complement(994588..996339)
AA seq 583 aa
MIYRNKNLSTWQIFRRLWPMITPHKMGLFISALALIFNAAGDTLMLSLLKPLLDDGFSKA
NKSVILYMPLAIVGLILIRGVTTYISNYCMSWVSGNVVMNMRRRLFRHIMGMPVAFFDQQ
STGTLLSRITYDSEQVASSSSHALVIVVREGALIISLFIMMLYYSWLLSLVLILLAPILS
FAIRIVSKRFRIISQNMQNIMGQVTTTAEQMLRGHKEVLIFGGQETEVKRFWQISNKMRQ
QSMKLVSTASISDSIIQLIASLALVFVLYAASFPKVIETLSAGIITVMFSSMIALMRPVK
SLTNVNAQFQRGMEACQTLFNILDSDQEIDNGKYEMNRAKGDIEFRNVTFTYPGLDIPVL
LNINLVLQSGKTVALVGRSGCGKSTIASLLTRFYDVSQGQILLDGLDLREYRLHSLRNQV
ALVSQNVHLFNDTVANNIAYARQGQYTREEIEHAATMAHAMDFIKKMPEGLDTIIGENGI
LLSGGQRQRIAIARALLRNSPILILDEATSALDSESEHVIQLALDTLQKNRTSLIIAHRL
STVEKADEIVVLEEGCIVERGTHNLLLAHKGIYSQLYKLQFGQ
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgatatatcgaaataaaaatctttcaacatggcaaatatttcgacgactttggccgatg
attacgccacataaaatgggcttatttatatctgctttggcacttatatttaatgctgct
ggtgatactttaatgctatctttattaaaacccttgttagatgatggatttagtaaagct
aataaatcagttatactgtatatgccattagctattgttggtctgatattaattcgtgga
gtgacaacttatatatctaattactgtatgtcttgggtatccggaaatgtagtgatgaat
atgcgccgtcgtcttttcaggcatattatgggcatgccagttgcatttttcgatcaacaa
tcaacaggaacattattatcgcgcattacttatgattcagaacaagtagcttcttcgtct
tctcatgcattagtaatagtagtacgtgaaggagctttaattatcagtctattcataatg
atgctttattatagttggttattgtcgctagttttaattttattagcacctatactttct
tttgcaattcgtattgtttctaaacgttttcgcattattagtcaaaatatgcaaaatatt
atggggcaagttacgactactgccgaacaaatgttacgaggacataaagaggtcttaatt
tttggtggacaagaaacagaagtaaaacgtttttggcaaattagcaataagatgcgtcaa
cagagtatgaaacttgtatctacagcatcaatttctgattcaatcattcaacttattgca
tcattagctctggtttttgtactctacgctgcgagttttccaaaagtaatcgagacactt
agtgcaggtattattacagttatgttttcctcaatgatcgctctaatgcgacccgtaaaa
tcattgactaatgtgaacgcacaattccagcgtggtatggaagcatgtcaaacattattt
aatatcttagacagcgatcaagagatagataatggtaaatatgaaatgaaccgtgcaaaa
ggtgacattgaatttcgtaacgtaacttttacctatcctggtcttgatataccagtatta
ttgaatattaatcttgtcttgcaatcaggaaagacagtagcgctagtaggtcgatcaggt
tgtggtaaatccactatagcaagtctgttgacacgtttttacgatgttagtcaaggtcaa
attttacttgatggtcttgatttacgtgaatatagactgcattcgctacgcaatcaagtt
gctttagtttcgcaaaatgttcatctctttaatgatacagttgctaataatattgcttat
gcacgtcaaggtcaatatacgcgagaagaaattgaacatgctgcaactatggcacatgcc
atggattttatcaaaaaaatgcctgaaggtttagatacaataattggtgagaacggcatt
ttactttctggtgggcaacgtcaacgaattgctatcgcacgcgccttactacgtaacagt
cctattttaattcttgatgaagccacatctgctttagattctgaatcagaacatgttatc
caattagcattagatacacttcaaaaaaatcgtacttcattaattattgcacatcgtcta
tctacagtagagaaagctgatgaaattgtagttcttgaagaggggtgtatcgttgaacgt
ggtacacataatttgttattagcacataagggtatatattcacaactttacaaattacaa
tttggtcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system