KEGG   Homo sapiens (human): 200316
Entry
200316            CDS       T01001                                 

Gene name
APOBEC3F, A3F, ARP8, BK150C2.4.MRNA, KA6
Definition
(RefSeq) apolipoprotein B mRNA editing enzyme catalytic subunit 3F
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    200316 (APOBEC3F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    200316 (APOBEC3F)
Enzymes [BR:hsa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.-  
     200316 (APOBEC3F)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     200316 (APOBEC3F)
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 AID dCMP_cyt_deam_1 Toxin-deaminase Hairy_orange SGNH
Other DBs
NCBI-GeneID: 200316
NCBI-ProteinID: NP_660341
OMIM: 608993
HGNC: 17356
Ensembl: ENSG00000128394
Vega: OTTHUMG00000151080
Pharos: Q8IUX4(Tbio)
UniProt: Q8IUX4
Structure
PDB: 

Position
22q13.1
AA seq 373 aa
MKPHFRNTVERMYRDTFSYNFYNRPILSRRNTVWLCYEVKTKGPSRPRLDAKIFRGQVYS
QPEHHAEMCFLSWFCGNQLPAYKCFQITWFVSWTPCPDCVAKLAEFLAEHPNVTLTISAA
RLYYYWERDYRRALCRLSQAGARVKIMDDEEFAYCWENFVYSEGQPFMPWYKFDDNYAFL
HRTLKEILRNPMEAMYPHIFYFHFKNLRKAYGRNESWLCFTMEVVKHHSPVSWKRGVFRN
QVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLT
IFTARLYYFWDTDYQEGLRSLSQEGASVEIMGYKDFKYCWENFVYNDDEPFKPWKGLKYN
FLFLDSKLQEILE
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaagcctcacttcagaaacacagtggagcgaatgtatcgagacacattctcctacaac
ttttataatagacccatcctttctcgtcggaataccgtctggctgtgctacgaagtgaaa
acaaagggtccctcaaggccccgtttggacgcaaagatctttcgaggccaggtgtattcc
cagcctgagcaccacgcagaaatgtgcttcctctcttggttctgtggcaaccagctgcct
gcttacaagtgtttccagatcacctggtttgtatcctggaccccctgcccggactgtgtg
gcgaagctggccgaattcctggctgagcaccccaatgtcaccctgaccatctccgccgcc
cgcctctactactactgggaaagagattaccgaagggcgctctgcaggctgagtcaggca
ggggcccgcgtgaagattatggacgatgaagaatttgcatactgctgggaaaactttgtg
tacagtgaaggtcagccattcatgccttggtacaaattcgatgacaattatgcattcctg
caccgcacgctaaaggagattctcagaaacccgatggaggcaatgtatccacacatattc
tacttccactttaaaaacctacgcaaagcctatggtcggaacgaaagctggctgtgcttc
accatggaagttgtaaagcaccactcacctgtctcctggaagaggggcgtcttccgaaac
caggtggatcctgagacccattgtcatgcagaaaggtgcttcctctcttggttctgtgac
gacatactgtctcctaacacaaactacgaggtcacctggtacacatcttggagcccttgc
ccagagtgtgcaggggaggtggccgagttcctggccaggcacagcaacgtgaatctcacc
atcttcaccgcccgcctctactacttctgggatacagattaccaggaggggctccgcagc
ctgagtcaggaaggggcctccgtggagatcatgggctacaaagattttaaatattgttgg
gaaaactttgtgtacaatgatgatgagccattcaagccttggaaaggactaaaatacaac
tttctattcctggacagcaagctgcaggagattctcgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (10)   
   OC (1)   
   PHAROS (1)   
   VEGA (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (43)   
   RefSeq(nuc) (7)   
   GenBank (18)   
   EMBL (18)   
Protein domain (15)   
   Pfam (15)   
All databases (101)   

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