KEGG   Kordia sp. SMS9: KORDIASMS9_04248
Entry
KORDIASMS9_04248  CDS       T05562                                 
Symbol
clpC
Name
(GenBank) negative regulator of genetic competence ClpC/MecB
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
kos  Kordia sp. SMS9
Brite
KEGG Orthology (KO) [BR:kos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:kos03110]
    KORDIASMS9_04248 (clpC)
Chaperones and folding catalysts [BR:kos03110]
 Heat shock proteins
  HSP100
   KORDIASMS9_04248 (clpC)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 Sigma54_activat AAA_16 AAA_22 nSTAND3 IstB_IS21 AAA_18 AAA_7 AAA_14 Zeta_toxin TniB Torsin UVR RNA_helicase RuvB_N RsgA_GTPase AAA_3 Roc ATPase_2 KTI12 DNA_pol3_delta2 MMR_HSR1 bpMoxR DUF87 DUF815
Other DBs
NCBI-ProteinID: AXG71987
UniProt: A0A345H5Z9
Position
4861726..4864281
AA seq 851 aa
MDDNFSPRVKDVIAYSKEEALRLGHDFIGTEHLMLGLLRDGSGKAINILNALDVDLTHLR
RKVEILSPANPNVAVAPNEKRNLHLTRQAERALKTTFLEAKLFQSSSINTAHLLLCILRN
ENDPTTKLLNKLKVDYDNVKEQFKYMITNDDDYIDTPRSESFSDDNGGSQESSKENPFGS
SNSGGKVNKKSKTPVLDNFGRDLTALAEEGKLDPVVGREKEIERVSQILSRRKKNNPILI
GEPGVGKSAIAEGLANRIIKRKVSRILFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNE
LEKNDDIILFIDEIHTIVGAGGATGSLDASNMFKPALARGELQCIGATTLDEYRQHIEKD
GALERRFQKVVVQPTTVEETIEILENIKDKYEEHHNVSYTPEAIKACVSLTNRYMTDRFL
PDKAIDALDEAGSRVHITNIDVPKQILDLERQLEEVRELKNSVVKKQKYEEAAKLRDDEK
RLEKELAISQEKWEEESKQHKETVSEDNVADVVSMMTGIPVNRIAQTESNKLAQLPELIK
GKVIGQDEAVGKVVKAIQRNRAGLKDPNKPIGSFIFLGQTGVGKTQLAKVLARELFDSED
TLIRIDMSEYMEKFAISRLVGAPPGYVGYEEGGQLTEKVRRKPYAVVLLDEVEKAHPDVF
NMMLQVLDDGYLTDSLGRKIDFRNTIIIMTSNIGARKLKDFGAGVGFGTSAQKSQADDHA
RGVIENALKKAFAPEFLNRIDDVVIFNTLEREHIHKIIDIEIAKLYSRIQGLGYDLRLSD
KAKDYIADKGFDKQYGARPLKRAIQKYIEDALAEEIITAKIHEGDKIFMDLDEDNDELTI
KIEKAEKPTES
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggatgataatttctccccaagggtaaaggatgtaatagcctacagcaaggaagaagca
ttgcgtctcggccatgatttcattggcacagaacatttaatgctcggacttcttcgtgac
ggaagcggcaaagccatcaacattttaaacgcattagatgtcgatttgacacatttgcgt
cgaaaagttgagattttgagtcctgccaaccccaatgtggcagtcgcaccaaacgaaaag
cgcaatttacacctaaccagacaagcagagagggcactcaaaactacatttttagaagcc
aaactttttcaaagttcttctatcaataccgcacatttattattgtgcattttacgaaac
gaaaacgatcctacaacgaaactattgaataagttgaaagtggattatgataatgttaaa
gagcaatttaagtatatgataacaaatgacgatgattatatagacacgccgcgttcagaa
tcattctcggacgataatggcggttcgcaagaatcttctaaagaaaatccgtttggatct
tctaattcaggaggaaaagtaaacaaaaagtccaaaacaccagtactcgacaatttcgga
agagatttgacagcgctggcagaagaaggaaaattagatcctgtggttggacgtgaaaag
gaaatagaacgtgtttctcaaattttgagtagacgtaaaaagaataatccaattttaatt
ggagaaccgggtgttggtaaatctgccattgccgaaggtttggctaatagaattataaaa
cgtaaagtgtctcgtattctttttaataaaagagtcgtaacgttagatttggcaagctta
gtcgctggtacaaaatacagaggtcagtttgaagagcgcatgaaagccgtgatgaacgaa
ctagaaaagaatgatgatattattctcttcattgatgaaattcacaccatcgtgggcgca
ggtggcgcaacaggaagcttagacgcctctaacatgtttaaaccagcgttggcaagaggt
gagctgcaatgtattggagccactacgctagatgaatacagacaacatattgaaaaagat
ggcgctttagaacgacgtttccaaaaagtagtggtacaaccgactacggtagaggaaacc
atcgaaattctagagaacatcaaagataaatatgaagaacatcacaatgtaagctataca
cctgaagccattaaagcatgtgtttcgttgaccaatagatacatgacagatcgttttctt
ccagacaaggccattgatgctttagatgaagcaggatcaagagtgcatattacaaatatt
gacgtgccaaagcagattttagacctagaacgccaattagaagaagtgcgtgaattgaaa
aattctgtcgtgaaaaagcagaaatatgaagaagctgccaaattgagagacgacgaaaaa
cgtttggaaaaagaattggcaatttcgcaagaaaaatgggaagaagaatccaaacaacat
aaagaaaccgtaagcgaagacaatgtcgcggatgtcgtttccatgatgactggaattcct
gtaaatagaattgcacaaacagaaagtaacaaattagcacaacttcctgagttaatcaaa
ggaaaagtaattggacaagatgaagcggttggaaaagttgtaaaagcgattcagcgtaac
cgtgctggactaaaagatccaaataagccaattggttcatttattttcttaggacaaact
ggagttggtaaaacacagttggcaaaggtattagctcgtgagttatttgattctgaagat
actttgatcaggattgacatgagtgaatacatggaaaaatttgctatttctcgtttggtt
ggtgcacctccaggatacgttggttatgaagaaggcggacaattaacggagaaagttcgt
agaaaaccgtatgcagttgtattgcttgatgaagttgaaaaagcgcatccagatgtattt
aacatgatgctacaagtattggacgacggttatttaacggatagtttaggaagaaagatt
gactttagaaatacgatcatcattatgacatcgaatatcggtgcacgtaagttgaaagat
tttggagctggagttggctttggaacgagtgctcaaaaatcgcaagcagacgatcatgcc
agaggtgttattgaaaatgcgttaaagaaagcatttgcgcctgaattcttaaatagaatt
gacgatgttgtcatctttaatacgcttgagcgcgaacatattcacaaaatcattgatatt
gaaatcgcaaagttgtattcaagaatccaaggtttaggatacgatttacgattaagtgac
aaagcaaaagactacatcgctgataaaggttttgacaagcaatatggtgcaagaccgtta
aaaagagccattcaaaaatatattgaagacgctttagccgaagagattattacggcaaaa
attcatgaaggagataaaatctttatggatttagacgaagacaatgatgagttaactatt
aagattgaaaaagcagaaaagcctactgaatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (37)   

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