KEGG   Lactobacillus acidophilus La-14: LA14_0714
Entry
LA14_0714         CDS       T02647                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
lad  Lactobacillus acidophilus La-14
Pathway
lad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LA14_0714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lad03400]
    LA14_0714
DNA repair and recombination proteins [BR:lad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LA14_0714
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LA14_0714
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 DUF87 AAA_30 SLFN-g3_helicase PepSY AAA_5 Kinesin AAA_7 T2SSE DUF1844
Other DBs
NCBI-ProteinID: AGK93887
Position
678876..680927
AA seq 683 aa
MIKRQKDRKFELVSKFKPAGDQQQAINKLTAGFEKGYKEQILEGATGTGKTFTMANIIAK
LNKPTLVITHNKTLVGQLYGEFKGFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDSAI
NDEIDQLRHATTSALMERNDVIVVASVSCIYGLGDPKEYARSVLMIHEGQEYERNTLLRD
LVNLQYDRNDIDFQRGRFRVRGDVVEIFPAGNSNHAYRVEFFGDEIDRIVEIDSLTGEVI
GERESISLFPATHFMTNDEQLRRALKAISKEMKVQVKKFEGEGKLLEAERIKQRTTYDME
MMGEVGYTNGIENYSRHMEGRKVGEPPYTLLDFFPDDFLILIDESHATMPEIRAMYNGDR
NRKKTLIDYGFRLPSALDNRPLKLAEFEKHVNQILYVSATPGDYELERTDHKVEQIIRPT
GLLDPKIEVRPIEGQIDDLVGEINKRIDRNERVFVTTLTKKMAEDLTDYLKDLGIKVRYL
HSDIKTLERMQILRDLRLGKFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRAYRPLV
QTMGRAARNANGEVIMYADTITDSMKAAIEATQRRRKLQEEFNKEHGIVPKTIIKPVHDV
ISITKPSEDSKKEKTDSFADLNFDELTAKQKKTMIKNLQEQMKEAAKKLDFEEAANLRDA
IMELQSSSRRPKTRKGKALNGKR
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgataaaacgacaaaaagatcgtaagtttgaattagtatcaaaatttaagccggcaggg
gaccagcagcaagctatcaataagttgacagcgggttttgaaaagggatataaggaacaa
attttagagggtgccactggtactgggaagacttttaccatggctaacattattgctaag
cttaacaagccaactttggtcattacacataataaaacattggttggtcagctttatggc
gaatttaagggatttttccctaataatgcggttgaatattttgtctcatactatgattac
tatcaaccagaagcgtatgttccacaatccgatacatacattgaaaaagattctgcaatt
aatgatgaaattgatcaattgcggcatgctactacttcagctttaatggagagaaatgat
gtaatagttgttgcttcggtttcatgtatttatgggttgggtgatcctaaagaatatgct
cgtagtgtattaatgattcatgaaggacaagaatatgaacgtaatacgttattacgtgat
ttagtaaacttgcaatatgatcgaaatgatattgattttcaacgaggacgttttcgggtc
cgtggtgacgttgtagaaattttcccagcaggaaattctaaccatgcctatcgtgttgaa
tttttcggtgatgaaattgaccgaattgttgagatcgattctttaactggggaagtaatt
ggtgagcgtgagagtatatcgctgtttccggctacgcacttcatgactaatgatgaacaa
ttaagacgagctcttaaggcgatttctaaagaaatgaaagtgcaagttaaaaagttcgaa
ggcgaaggtaaattgcttgaagccgaaagaattaaacaaagaactacctatgatatggaa
atgatgggagaagttggttataccaacggaattgaaaattactcaaggcatatggaaggt
agaaaagtaggagagccaccatatactttgcttgatttcttcccagatgattttttgatt
ttaattgatgaatctcatgcaaccatgccagaaattagagcgatgtacaatggagatcgt
aatcgtaaaaagaccttaattgattatggctttcgtttaccatcggcacttgataaccgt
ccactaaagttggcagaatttgaaaaacatgttaaccaaattttatacgtttctgctact
cctggagattatgaacttgagaggacagatcacaaggtagagcagattattcgtccaacg
ggattattggatcctaagattgaagtaaggccaatcgaaggacaaattgatgatttagtc
ggagaaataaataagcggatagatcgtaatgaacgtgtttttgttactactttaactaaa
aagatggccgaagatctgacagattatttaaaagatctgggtattaaagttcgttattta
cattcagatattaaaacgcttgaaagaatgcagatcttacgtgatttacgtttgggtaaa
tttgatgtactgattgggattaacttacttcgtgaaggtattgacgtgcctgaggtatcg
ctagtggcgattttagatgcagataaagaaggttttcttagagcataccggccattagtt
caaacaatggggcgtgcagcacgtaatgcaaatggagaagtaattatgtatgctgatacg
attaccgattcgatgaaagcagctatcgaggcaacccagagaagacgcaagttacaggaa
gaatttaataaagaacacgggattgttcctaagacgattattaaacctgttcatgatgtt
atttcaattactaagccatctgaagactctaagaaagaaaaaacagatagttttgcagat
ttgaattttgatgaattaacagctaaacaaaagaagacgatgattaagaatttgcaagaa
cagatgaaagaggccgctaagaaacttgactttgaagaagcagcaaacttgcgggatgca
ataatggaattgcagtcatcatctagaagaccaaaaacaagaaaagggaaggcattaaat
ggtaaacgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system