KEGG   Methanobacterium paludis: MSWAN_1061
Entry
MSWAN_1061        CDS       T01509                                 
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
mew  Methanobacterium paludis
Pathway
mew03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MSWAN_1061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mew03400]
    MSWAN_1061
DNA repair and recombination proteins [BR:mew03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MSWAN_1061
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MSWAN_1061
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD SWI2_SNF2 AAA_22 AAA_30 Kinesin Microtub_bd DUF87 HEPN_LA2681
Other DBs
NCBI-ProteinID: AEG18082
UniProt: F6D483
Position
1150415..1152379
AA seq 654 aa
MTGFKLESAYEPLGDQPKAINSLSEGIKKGLKHQTLLGVTGSGKTFTMANVIQKVQKPTL
VISHNKTLAAQLYEEFKEFFPDNAVEYFVSYYDYYQPEAYIAHTDTYIDKEASINEEIDR
MRHSTTQSLLSRDDVIVVSSVSCIYGIGTPEDYGGFILSLKLGDEPGREEILTKLVEMQY
ERNDIEFIRGKFRVRGDVIEIFPVNSTIAIRLELFGDEVDGISFIDPLKGTVIKELERIT
VFPAKHFITSKEKLESGIKGIEEELEDRLTVLRSQNKLLEAQRLEQRTRFDLEMLQEMGY
CTGIENYSMHLSGRKWNETPYTLLKYFPEDYLTIIDESHVTVPQIGGMYAGDKARKDSLV
GYGFRLPSARENRPLKFDEFERLQNQVMYVSATPAKYELGKSQNVVEQIIRPTGLVDPEV
IVKPVKGQVDHLLGAIQEKVKQNQRILVTTLTKKMAEDLTDYYAKVGIKVRYLHSEIGTL
ERTEIIDDLRRGEFDCLVGVNLLREGLDLPEVSLVGILDADKEGFLRSQTSLIQTIGRAS
RNINGQVIMYADEITESIRSALDVTNRRRTIQVAYNKEHDITAKSVVKSIKEKTKKDETS
LVDDITDIENIPKDELSLLIKDLEQEMKKAALKLDFEKAAKIRDKILVLEGVSK
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgacaggatttaaacttgaatcagcttatgaaccgttaggggaccaaccaaaagctata
aattccctttcagagggaataaaaaaaggtttgaagcatcaaacattacttggtgttaca
gggtctggtaagacattcacaatggctaacgtcattcaaaaggttcaaaaacctaccctt
gtgatatctcacaacaaaacattagctgcacagctttacgaagagtttaaggagtttttc
ccagataacgccgtggaatacttcgtaagttattatgactattatcaaccagaagcttac
atagcacacacagacacttacatagataaagaagcatcaataaatgaagaaatagaccgt
atgcggcactccacaacccaatctctcctctcaagggatgacgtaatagttgtatccagt
gtttcatgcatatatggtattggaactccagaagattacggtggatttatattatccctt
aaactgggtgatgaacctggaagagaggaaattctcacaaaacttgtggaaatgcagtac
gaaagaaacgatatagaatttataaggggaaaattcagagttcgaggagacgtaatagaa
atatttcctgtaaacagtaccattgccattagattggagctttttggcgacgaagtggat
ggtatatcattcatagacccgttgaaaggtacagtaatcaaagaacttgaaagaataaca
gtatttcctgcaaaacattttataacatccaaagaaaagctggaaagtggaataaaaggt
attgaagaagaacttgaagacagattaactgttctaagatcccagaacaaactccttgaa
gcccaaagattggaacagagaacccggtttgaccttgagatgcttcaggaaatgggttac
tgtacaggcatagaaaactattccatgcatctttcaggcagaaaatggaatgaaacacca
tacacattacttaaatatttcccagaagattacctcaccataatcgatgaatcccatgtt
acagtaccccaaattgggggaatgtacgctggagataaggcccgtaaggattcccttgta
ggttacggtttcagactcccatctgcacgtgaaaaccgtccattaaaatttgatgagttt
gagagacttcaaaaccaggtcatgtacgtatctgcaacaccagccaaatacgagcttgga
aagagtcaaaatgtggtagaacaaataataagacctacaggacttgtagatccagaagtg
atagttaaaccagttaaaggacaggttgaccacctcttaggagctatacaggaaaaagtt
aaacagaaccagaggattctggtaaccacactaaccaaaaaaatggcagaggatcttaca
gattactatgcaaaggtaggaattaaagtcagataccttcactctgaaatcggaaccctt
gaaagaacggaaataattgacgacctcaggagaggggaatttgactgccttgtaggtgtg
aacctcctcagggaaggtctggaccttccagaggtttcccttgtaggcattctcgatgca
gataaagagggattccttcgatcacaaacctcacttatacaaaccataggcagggcttca
agaaatatcaacggccaggttataatgtacgctgatgaaataacagaatccatacgttcg
gctcttgatgtaactaaccgccgtagaacaattcaggtggcctacaacaaagagcatgat
ataaccgcaaaatcagtggtaaaatctataaaggaaaaaactaaaaaagatgaaacatct
ttagttgatgatattacagatatagaaaacattccaaaagatgaattaagtcttttaata
aaagatttagaacaagaaatgaaaaaagcagctttaaaacttgattttgaaaaagctgca
aaaataagggataaaatacttgttttagaaggggtttcaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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