KEGG   Mesorhizobium japonicum MAFF 303099: mlr6397
Entry
mlr6397           CDS       T00043                                 
Name
(GenBank) conjugal transfer protein; TraB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
mlo  Mesorhizobium japonicum MAFF 303099
Pathway
mlo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:mlo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    mlr6397
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mlo02044]
    mlr6397
Enzymes [BR:mlo01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     mlr6397
Secretion system [BR:mlo02044]
 Type IV secretion system
  Trb secretion system protein
   mlr6397
SSDB
Motif
Pfam: T2SSE nSTAND3 DEAD AAA_16 Zeta_toxin TrwB_AAD_bind FtsK_SpoIIIE ATPase GTP_EFTU AAA_28 CbiA AAA_19 CPT AAA_22 ResIII AAA_29 Dynamin_N SRPRB P-loop_TraG MMR_HSR1 ABC_ATPase IstB_IS21 KTI12 AAA_7
Other DBs
NCBI-ProteinID: BAB52702
RhizoBase: mlr6397
UniProt: Q989J4
Position
5220585..5221553
AA seq 322 aa
MSAHPEADHRRRAMLRTAMGPTITEALADPLVIEVMVNPDGALRLDRLGEGRIDTAVHMH
PSEAERIIRLVASHVRAEAHADNPIVSAELPSGERFEGLLPPVVLAPCFAIRKPAAKLYT
LANYVADRIMLPLQADALIKAVRERRNILVAGGTSSGKTTLANALLAEVAECDERVILIE
DTRELQCAAKDCVALRTRRGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDMLKAWNTGH
PGGIATVHANSARSALYRIEQLAQEAVVTVPRRLIADAIDLIVFIAGRGSSRRIDAIAEV
TGLDGSGDYAVSPLTPPQLQQL
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagcgctcatccagaggccgaccaccgacgccgcgccatgctgcgcaccgccatgggt
ccgacgatcactgaggcgctggccgatccattggtcatcgaggtgatggtcaatcccgat
ggtgcgctgcggctcgaccggctgggagaaggccgaatcgatacggccgtgcatatgcat
ccttccgaggcggaacgcatcatccgcctggtcgcttcccacgtgcgtgccgaggcgcat
gcggacaatccgattgtcagcgccgaattgccatcgggcgaacgcttcgagggactgctg
ccgcctgtcgtgctggcgccttgctttgccatccgcaaaccagccgcaaagctctacacg
ctggccaactatgttgcggatcgcatcatgttgccgctgcaggccgatgcgttgataaag
gcagtccgagaacggcgcaacatccttgtcgccggaggcacgtcgtcgggtaagacgacg
cttgccaatgcgctgctggccgaagtcgccgaatgcgacgagcgagtgatcctcatcgag
gacacccgcgaactgcaatgcgcagcaaaggactgcgttgccctgagaaccaggcggggc
tcggtcacactcgccgatctcgtgcgctcgacgctccggctccgtcccgaccgcatcatc
gtcggtgaagtcaggggcgcggaagcgctggacatgctcaaggcatggaacaccgggcac
cccggcggcatcgccacggttcatgccaattcggcgcgctctgccctctatcgcatcgag
cagcttgcacaggaagctgtcgtcaccgtgccgcgccgcctcatcgccgatgccatcgat
ctcatcgtcttcatcgcggggcgcggctcgtcgcgccgcatcgatgcaatcgctgaggtc
acaggtctcgacggcagcggcgactacgccgtctccccactcacgcctccgcaactccag
caactctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system