KEGG   Methylocystis parvus: F7D14_19585
Entry
F7D14_19585       CDS       T06304                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mpar  Methylocystis parvus
Pathway
mpar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    F7D14_19585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpar03400]
    F7D14_19585
Enzymes [BR:mpar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     F7D14_19585
DNA repair and recombination proteins [BR:mpar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     F7D14_19585
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 AAA_29 nSTAND3 HHH_2 NTPase_1 AAA_16 MeaB PIF1 T2SSE RsgA_GTPase UvrD-helicase AAA_22 Helicase_RecD DEAD AAA_28 ABC_tran NACHT CbiA cobW AAA_25 AAA_23 AAA_17 AAA AAA_18 TrwB_AAD_bind ATP_bind_1 AAA_24 SMC_N
Other DBs
NCBI-ProteinID: QGM99814
UniProt: A0A6B8M6U8
Position
unnamed1:complement(11695..13929)
AA seq 744 aa
MAACYNSGATAPPRKLRLQPSANSTPPKETLVGSVERVTFHNEDNGFAVLKVKARGKRDL
VPVVGHVASISAGEFIHAVGVWTTDRAHGLQFKADFLKTTPPTTAEGIEKYLGSGMVRGI
GPVLAKRIVAAFGEKTFEIIEAEPERMREVSGIGEFRAGKIVAGWAEQKAVRDIMVFLHA
NGVGTSRAVRIFKTYGHDAIQVMTENPYRLARDIRGIGFKTADAIAMKLGMARDAPQRVR
AGISYALQEAMDEGHCGLPVEELVKLTVTLLDVDERIVQSALKAELADGEVVADAIEGKP
CVFLRGLHLAERGAADRLLALARGASPWPTIDAAKAIPWVEARTGKTLAASQRAAVETVL
ASKVAVVTGGPGVGKTTLLDAILRILAAKGTKLLLAAPTGRAAKRMADQTGLEAKTIHRL
LETDPKNGGFRRDADNPLDCDLLVLDETSMVDATLMFSVLKAIPPRAGLLLVGDVDQLPS
VGPGQVLADVIASGALPVARLTEVFRQAAESRIVVNAHRINRGEMPEWPKREETSDFYFV
EAGDPEKGAAKVVEIVRDRIPRRFGLDSIADVQVLCPMQRGALGARSLNADLQKALNPNM
AERVERFGSTFAPGDKVMQTENDYDREVFNGDLGRILRIDQADGILWVDFDGREVEYPFG
ELDTLVPAYATTIHKSQGSEYPAVVITLATQHYTMLARNLVYTAVTRGKRLVVIVGQRRA
LAIAVRTHGRKRRWTKLKEWLTAT
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcggcctgctataatagcggcgccacagctcctcctcggaaactccgtttgcagcct
tcagccaactcgaccccgcccaaggaaaccctcgtcgggtccgtcgagcgggtgaccttc
cacaacgaagacaacggcttcgcggtcctgaaggtgaaggcacggggcaagcgagatctg
gtcccggtcgtcgggcatgtcgcctcgatctcggccggcgagttcatccacgccgtcggc
gtctggaccaccgaccgcgcgcacgggctacagttcaaggcggacttcctcaagacgacg
ccgccgacgactgcggagggcatcgagaagtatctcgggtccggcatggtgcggggcatc
ggaccggtgctcgccaagcggatcgtcgccgccttcggcgagaagaccttcgagattatc
gaggctgagcccgaaaggatgcgggaggtctcgggcatcggcgaattccgcgccggtaaa
attgtcgccggctgggccgagcagaaggcggtgcgcgacatcatggtcttcctgcacgcc
aatggcgtcggcacgtcgcgggccgttcgtatcttcaagacctatggccacgacgccatc
caggtcatgacggaaaatccttacaggctggcgcgggacatccgcgggatcgggttcaag
accgccgacgccatcgccatgaagctgggcatggcgcgggatgcgccgcagcgggtccgg
gcggggatttcctacgcccttcaggaggcgatggacgaaggccactgcggcctgccggtg
gaggagctggtcaagctcaccgtcacactgctcgatgtcgacgagcgcatcgtccagagt
gcgctgaaagcggaactcgccgatggcgaggtcgtcgccgatgcgatcgaggggaaaccc
tgcgtgttcctgcgcggcctgcacctcgccgagcgcggcgccgccgaccggctgttggcc
ttggcccgaggggcgtcgccgtggccgacgatcgacgccgcgaaggccatcccctgggtc
gaggcgcgaaccggaaagacgttggcggcctcgcagcgcgccgccgtcgagacggtcctg
gcctcgaaggtcgccgtcgtgacaggcggccccggcgtcggcaagacgacgctgctcgac
gccatcctccgcatccttgccgccaagggaacgaagctcctcctggcggcccccaccggt
cgcgccgccaagcgtatggccgaccagaccggcctcgaagccaagaccatccatcgcctg
ctggagaccgacccgaagaacggcgggttccgccgcgacgccgacaatcccctcgactgc
gatctccttgtcctcgatgagacaagcatggtcgacgcgacgctgatgttttcggtgctc
aaggcgatcccgccgcgggccgggctgctgctcgtcggcgacgtggaccaactcccctcg
gtcgggccggggcaggtactcgccgacgtcatcgcctccggcgcgctgccggtcgcgcgg
ttgaccgaggtcttccggcaggcggcggagagtcggatcgtcgtcaacgctcaccgcatc
aaccgcggagagatgccggaatggcccaagcgcgaggagacgtccgatttctatttcgtc
gaggccggcgatccggaaaagggcgcggccaaggtcgtcgagatcgtccgggaccgcatt
ccccggcgctttggcctcgattccatcgccgacgtgcaggtcctctgcccgatgcagcgt
ggcgccctcggcgcccggtcgctcaacgccgatctccagaaggccctcaacccgaacatg
gccgagagggtcgagcgcttcgggtcgaccttcgcgcctggcgataaggtgatgcagacg
gagaacgactacgaccgcgaggtgttcaacggcgatctcgggcgcatcctccgcatcgat
caggccgacggcatcctgtgggtcgatttcgacgggcgcgaggttgaatatccgttcggc
gaactcgacacgctggttcccgcctatgcgacgacgatccacaagtcgcagggctccgaa
tatcccgccgtcgtcatcaccctcgcgacccagcactacacgatgctggcgcgcaacctc
gtctacacggcggtcacgcgcggcaagcgccttgtcgttatcgtcgggcagcggcgcgcc
ctcgccatcgccgtgcggacacacgggcggaagcggaggtggacgaagctgaaggagtgg
ctcacggcgacatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (44)   

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