KEGG   Mesoplasma syrphidae: CXP39_01945
Entry
CXP39_01945       CDS       T05255                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
msyr  Mesoplasma syrphidae
Pathway
msyr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CXP39_01945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msyr03400]
    CXP39_01945
Enzymes [BR:msyr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CXP39_01945
DNA repair and recombination proteins [BR:msyr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CXP39_01945
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 SH3_13 AAA_11 HHH_4 PhoH PIF1 AAA_12 UvrD-helicase nSTAND3 AAA_22 TsaE AAA_28 NTPase_1 T2SSE DEAD AAA_7 Helicase_RecD AAA_16 AAA AAA_18 Mg_chelatase AAA_5
Other DBs
NCBI-ProteinID: AUF83553
UniProt: A0A2K9BND6
Position
463227..465431
AA seq 734 aa
MDELKTLRGYIFKTLYSNADGWGIAIFSSEENRKLQIKIKGNIGLMRNKVLYEIKGKFES
HVKFGKTFAVESYKIGETNSLEQTIKYLSSPLFPGVGKRAAETICEYYKINVIRKIKENY
DELFQIPGLDSKQAYIIRQQMIAIQDSERLTEIFFENDLKIDILNQMKKHTDSDEEIESI
FKNHFYAFATRRRLRSFEDVDKIALHFGQEEFGRERIAYWAQKLATDILMQTGDTYTDKT
ALFTKIFKTLNIEDESTVIQGILYAKEHDLLILTEQRIYTYESYNDEQIIAKKLIEINET
QKLVSEERLELLIDEVEKSIARSSKDDSFKYDEEQRQALRMFAHNKLFILTGGPGTGKTT
VIRGMVKLFNMLYNEPSIAIAAPTGRAASRIRESSWELPATTLHRLLCANSNDDFDIDAN
NPLHHNLIIVDECSMIENRLFSQFIQSIGSAKKIVLVGDVNQLASVGFGNMFEDIIQVQK
FPVMILKSIHRQKGGNGIIDLAYTIQESNLDYLDFSNLTNVNCRFTEDADTGLEQVKTIF
SSEKIELEQSPLNLQIIAPVYAGKLGIENLNNVIQAEYNDNILDQSKVYDRGRFRYTLKD
KIMFLKNDSQLDLANGDIGIIETINFKGDKFENAFVDFSNSQAVLESSNFNDVSLSYACS
VHKTQGSEYKKVILTIENGKTAFFLNKKILYTAVTRAKDELFIVGSKSLFLKAAKRLPPQ
RKTTLKQVILRNSN
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggatgaactaaaaacactacgcggatatatctttaaaactttatattcaaatgctgat
ggatgaggaatcgctatttttagcagcgaagaaaatcgcaaattacaaataaaaattaaa
ggtaatattgggttaatgcgcaataaagttctttatgagattaaaggaaagtttgaaagt
catgttaagtttggaaaaacttttgctgttgaatcatataaaattggggaaacaaactct
ttagaacaaaccattaaatatttatcatcaccattgtttcctggagttggaaaaagagca
gctgaaactatttgcgagtactacaaaattaatgttattcgtaaaattaaggaaaactat
gatgagttatttcaaattccaggtttggattcaaaacaagcatatattattcgtcaacaa
atgatcgcaattcaagacagtgagcgtttaactgaaatcttttttgaaaatgatttaaaa
attgatattttaaatcaaatgaaaaaacatactgattctgatgaagaaattgaatcaatt
ttcaagaatcatttttatgcttttgcaactcgtcgtcgtttgcgtagttttgaagatgtt
gataagattgcactgcattttggtcaagaagaatttggtcgtgagcgaattgcttattga
gcacaaaaattagcaactgatattttaatgcaaactggagatacttatactgataagaca
gctttatttacaaagatttttaaaactttaaatattgaagatgaatctactgtaattcaa
ggaatcttatatgctaaagaacacgatcttttaattttaacagaacaacgtatttatact
tatgagagctataatgatgaacaaattattgcaaagaaattgattgaaattaatgaaact
caaaaactagtttctgaagaacgtttagaattactaattgatgaagtcgaaaaaagtatt
gcacgtagttctaaagatgatagctttaaatacgatgaagaacaacgtcaagcattaaga
atgtttgctcataataaattatttattttaactggaggacctggaactgggaaaacaact
gtaattcgtggaatggtgaagctttttaatatgctttataatgagccaagtattgctatt
gcggcgccaactggtcgagcagcttcaagaattagagaaagttcatgagaactaccagca
acaaccctacaccgtttattatgtgcaaattccaatgatgactttgatattgatgctaat
aacccattacatcataatttgattattgttgatgaatgttcaatgattgaaaatcgttta
ttttcacaatttattcagtcaattggaagcgctaaaaaaattgttttagtcggggacgta
aaccaattagcatcagttggatttggaaatatgtttgaagatattattcaagtccaaaaa
tttccagtaatgatcttaaaaagcatccatcgtcaaaaaggcggtaatggaattattgat
ttggcatataccattcaagaaagcaatttagattaccttgatttttcaaatttaactaat
gttaattgccgctttactgaagatgctgatactggcttagaacaagttaaaactattttt
agttctgaaaaaatagaacttgaacaatcaccactaaatttacaaattattgcaccagtt
tatgctggtaaattgggaattgaaaatttaaataatgttattcaagctgaatataatgac
aatattttagatcaaagtaaagtatatgatcgtgggcgttttcgttatactttaaaagat
aaaattatgtttttaaaaaatgattcacaattagatcttgccaatggagacattggaatt
atcgaaacaattaattttaaaggcgataaatttgaaaatgcctttgtagacttttcaaac
agccaagcagttttagaatcaagtaattttaatgacgtatcattatcttatgcatgtagt
gttcataaaactcaaggtagtgaatataagaaagttattttaacgattgaaaatggtaaa
actgcgtttttccttaataagaaaattttatatacagctgttactcgagcaaaagacgaa
ttgtttattgttggaagcaaaagtttatttttaaaagcagcaaaacgcttaccgcctcaa
cgaaaaactactttaaaacaagtgattttgagaaattctaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (35)   

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