KEGG   Notothenia coriiceps (black rockcod): 104951443
Entry
104951443         CDS       T04920                                 
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
  KO
K13338  peroxin-1
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    104951443 (pex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104951443 (pex1)
Membrane trafficking [BR:ncc04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    104951443 (pex1)
SSDB
Motif
Pfam: AAA PEX-2N PEX-1N AAA_lid_3 AAA_16 AAA_22 AAA_14 nSTAND3 RNA_helicase AAA_18 AAA_28 AAA_33 TIP49 DUF815 ABC_tran AAA_5 NACHT Sigma54_activ_2 AAA_29 Zeta_toxin Viral_helicase1 TsaE ATP-synt_ab RuvB_N Sigma54_activat AAA_2 ATPase Mg_chelatase AAA_7 AAA_25 FtsK_SpoIIIE APS_kinase IstB_IS21 CLP1_P AAA_23 Parvo_NS1
Other DBs
NCBI-GeneID: 104951443
NCBI-ProteinID: XP_010776394
UniProt: A0A6I9NFB1
Position
Unknown
AA seq 1236 aa
MFTNQGIQPVTVVFSNTKNCFLHISSKLISHLSLNENQALELSWGHGSPVFLSWTQNRSS
SSLNSHKVELCRQLGEKLGLKDGEQGFLRPCHQVSSVHQVFVEPLSFDDWEILELHSAAL
EQHLLDQIRVVFRDAVFPVWVDSHTAIYIQIASLSPSVPYGRLEQFTELIVSPKIRAGIG
NLNGSPMRQDDKQHFPGQQNMDHSSPSGTSLETTSPVLQSHQWGGIADLKSLLRFMIKGT
YDPVKELPPVPDVPALFPDSICRVCGVPPDSLCTISQVATAVVHLFPLSHWSNAVPTGGQ
SSVTYGLLSKVLSPKESRDRAKHAMEKKKNAGVTKVTEGKEFNEEEAIVVRVVCHDTEKQ
TSHSQREIHSGRVWIPQPLAVRLNIIPHSTVRIKPVKSAIKVASSIRLQPLIPLPEEDDE
EIKTAFLGWLHTQSHEPLACLTARSGTILLHGTDAKLEFALTVLKPEPGSDPTDQLFLLA
TPVVKKENIQVDRVTWPAVISVAESPNPELPSLSSLGGIHELSTNGFDFISHSLLGSPLS
RELGSTAQGLQGGALLITGAKGSGKSTLSRALCRRAREELDAHVELVDCKKLQGKRSETV
RQMLQDIFEQAEWRQPSVVLLDDLDHVTGAPTSPEHEHGPEALLQQHIAQSLQDVVDEVL
LHSSLVCLIITSQSEHSLHPSITEVQGSHFIQGFAHIQPPDQAQRAEILRHLILGKSCLF
EETLQTLDLAAVAKETEGYTPQDLELLLQRAVHANTVQRGHSDQGVCLLWRDFVQALKGF
TPPSLWGADLHTPSGVGLERVGGLREVRRQLMDTIMLPAKYPVLFSNLPIRHRSGILLYG
APGTGKTLLARAVAKDSGMNFISIKGPELLSKYIGASEQAVRDVFRRAQAAKPCILFFDE
FDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDK
SLYCPPPDLEDRVEILRALSSGVALAADVDLDQLATATEQFTGADLKALLYNAQLEAVHS
SMGSSTPHDLTCGSDSDMSLSSMMFPNNSSGSDDSVGEGDPGLDQSMVLLEPSELRAEEH
RGNVWRIYFGSSYESDVGNSPILGLNSQCVSGPNSTRASCRDQGGPLPPAFMSSLQSGYE
ELAPEQLERLQQDVQNIKNNYRSANEDSVRGPSASSRPGLLLCRLHLTSALTATAASLST
TDWNRYAKLYEAFGGVGEGQSAQSVTFKPGQRVTLA
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgtttactaatcaaggcattcaacccgtaactgttgtatttagcaacacaaaaaactgc
tttcttcatatctcttcgaagttaatatcgcatctttccttgaacgagaaccaggctttg
gagttgtcttggggccatggatccccagtatttctcagctggactcaaaacagatcctcc
tccagcctgaacagccataaagtggagctgtgtcgacaactgggagaaaaacttggcctg
aaggatggagagcagggcttcctgagaccatgtcaccaggtttcatctgtgcatcaagtg
tttgtggagcctctgtcatttgatgactgggagatcttggagctccacagtgcagcgctg
gagcagcatctgttggatcagatcagagttgttttccgagatgccgtgtttcctgtgtgg
gtggacagccacacagccatctacatccaaatagcatcgctttcgccatctgtgccatat
ggtcgcttggagcagttcacagaactaattgtctctcctaaaatccgcgctgggattggc
aacctcaatggctctccaatgagacaggacgacaagcagcattttcccggacagcaaaat
atggatcattcctccccttctggaacatcattagaaactacctcccctgtccttcaaagc
caccagtggggcggcatagctgacctgaagagcctgctacgcttcatgattaagggaact
tacgacccagttaaggagctgccacctgtacctgacgtgcctgccctctttcccgactct
atctgcagagtgtgtggtgtaccgccagactctctttgcactataagccaggttgcaaca
gccgttgttcatttatttcctctgagccactggtcaaatgctgtgccaaccggaggtcag
tcgtcagtgacttatggcctgctctcaaaagttctctcccctaaagaatcaagggacaga
gccaagcacgccatggagaaaaagaagaacgcaggagttactaaagtgacagaaggaaag
gaattcaatgaagaagaagccatagtggtcagggtggtctgccatgatactgagaagcaa
acaagtcacagtcagagagagatccatagtggaagagtatggatccctcagccccttgct
gtcaggttgaatatcatcccacattcaacagtgagaattaaaccggtgaaatcagctatc
aaagtggcttcctctattcgcttacagccgttaatacccctgcctgaggaagacgatgag
gagatcaagacagctttccttggttggctgcacactcagagtcatgagcctttagcctgt
ctgactgctcggtctggcaccatcctcctacatggaaccgatgctaagttagagtttgct
ttaactgtactgaaaccagaaccaggcagtgaccctacagaccagctgttcttactcgca
acccctgttgtcaagaaggaaaacattcaggtagacagagtcacatggccagctgtgata
tctgtagccgaatcacccaatccagagcttccctccctcagtagccttggtgggatccat
gagctcagtacgaatggatttgacttcatctcccacagccttctgggtagtcccctctca
agagagcttggtagcactgcgcagggtctccagggaggagctcttctcatcactggtgct
aagggaagtggaaaaagcactctttcccgagccctctgtagaagagctagagaagaactg
gatgcacatgtggagctggtggactgcaagaaacttcaaggcaaaaggtcagaaacagta
agacagatgctgcaggatatttttgagcaggcggagtggaggcagccttcagtcgttctt
cttgacgacctggaccacgtgactggggcgccaacatcaccagagcatgagcacggtcct
gaggcgctgctgcaacagcacatagcacagagtctgcaggatgtggtggacgaggtgctg
cttcactccagcctggtgtgtctgatcatcaccagccagagtgagcattccctccacccc
tccatcaccgaggtgcaggggtcccacttcatccagggcttcgcacacatccagccaccg
gaccaggctcaaagggcggaaatcctccgccatctgatactcggaaaaagctgcctgttt
gaggagaccttacagactctagacctggcggctgttgccaaggagacggagggatacaca
ccccaagaccttgagctactgttgcagcgggctgtccatgccaacacagtgcaaagagga
cacagtgaccagggtgtgtgtttgttgtggagggactttgtgcaggctctgaaggggttc
actcctccctcgctgtggggggcagacctccacaccccgagtggagtgggactggagagg
gtgggggggctgagggaggtgcgacggcagctgatggacaccataatgctcccggctaag
tatccagtcctgttctccaatctccccatccgccatcgctcaggaatattactgtatgga
gctcctggtacagggaagacgctgctggccagggccgtggccaaagacagtggcatgaac
ttcatcagcatcaagggccctgagcttctgagtaagtacattggagcgagtgagcaggca
gtccgcgatgtcttccggagggctcaagctgccaagccgtgcattctgttcttcgatgag
tttgactctctggcccccaggaggggccacgacagcacaggagtaacggaccgggtggtg
aaccagctcctcacccagctggacggggtggaggggctgcagggtgtttacgtgcttgca
gccaccagccgtccagacctgatcgacccggctctgctgagacctggacgactcgacaag
tccctctactgcccgcctcctgacctggaggatcgtgtggagatcctgagggctctgagc
tccggtgtggctctggctgctgacgtggacctggatcaactggccacagccacggagcag
ttcaccggggccgacctgaaggccctgctctacaacgcccagctggaggccgtccacagc
agcatgggctccagcacaccgcatgatctgacctgtggctccgacagcgacatgagcctg
tcctccatgatgttcccgaacaacagcagcggctcagatgactcggtgggggagggggac
ccgggcctggaccagtccatggtactgctggagcccagtgagcttcgagctgaagaacat
cgtggaaacgtttggagaatttactttggaagctcctacgagtcagatgtcgggaattca
cccattttaggactgaactcccagtgcgtctctggaccaaactcaacccgggcatcgtgt
cgggaccagggcggccccctcccccccgccttcatgtcctccctgcagagcgggtacgaa
gagctcgcccccgagcagttagagcgcctgcagcaagacgttcagaacatcaagaacaac
tacaggagcgccaacgaggacagtgttcgggggccgtcagcctccagccggcccggcctg
ctgctctgtcggctccatctgacctccgccctgactgcgaccgcggcgtcgctcagcacg
accgactggaacagatacgctaaactgtatgaagcctttgggggtgtaggagaaggacag
tctgcacaatcagtcacattcaaacctggacaacgtgtgactttagcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (36)   
   Pfam (36)   
All databases (66)   

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