KEGG   Neisseria meningitidis M01-240149 (serogroup B): NMBM01240149_0941
Entry
NMBM01240149_0941 CDS       T01930                                 
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
nmm  Neisseria meningitidis M01-240149 (serogroup B)
Pathway
nmm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NMBM01240149_0941 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nmm03400]
    NMBM01240149_0941 (recD)
Enzymes [BR:nmm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NMBM01240149_0941 (recD)
DNA repair and recombination proteins [BR:nmm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NMBM01240149_0941 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 AAA_11 Viral_helicase1 UvrD_C_2 Helicase_RecD AAA_22 SH3_13 UvrD-helicase SLFN-g3_helicase T2SSE AAA_28 AAA_5 nSTAND3 AAA_16 UvrD_C SRP54 DEAD NTPase_1 AAA TrwB_AAD_bind ATPase
Other DBs
NCBI-ProteinID: ADY97527
Position
1097015..1098760
AA seq 581 aa
MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQNGHSFIRLSGGEADALS
ALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAAGTSAPDAAGARQNLAKWF
QGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLALICGEDENLPNIALAAPTGK
AAAHMARALHRAINGFDAPEAIRRHLLKLEGQTVHRLLKLRPPKMQAAFNPVYPLPLDVL
VIDEASMLDTALMLQLLKAVKTGARVILLGDENQLPSVGIGAVLSVLSHKTVLDGETHQR
LAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGDNSGIGCLARAAVSGDEGAWALFDRFP
DELEHSECSPNARVERLYRAHKAYWQAVKDGNIEAAYAGISDIVVLAAWRQDAEDFNEAY
CSHVRRKMNIPEHQAYFAGEPIMIRQNDYALELFNGDIGLIMEDVGRQGSLAAYFADADG
FKKVAVSCLPDFEPAFAMTVHKSQGSEYREVWLLPPSAAPSDEGDDALSGLSKELLYTAI
TRAREKFVFFGGEETFRQAAATVKTRQTALGSMLERVFSQE
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggaacggcagacagatgaatttgcccaagcggcggcaagggcggcaatctggtttttg
gcacgctatgcgggttcaggcagcgaagtgcttgcaaactgcaccgaacgcctgtttcag
gcattgcaaaacggtcattcgtttatccgtttgagcggtggcgaggctgacgcgctgtcg
gcactcgcacccgtggtcggaacatccgccgcgcctttgattttggaaggcagaaggctg
tttttgggcaggatgtggcagttggaatacgatttggctgccgagataaaacgcttggcg
gcagccggcacgtccgcccccgacgcggcaggcgcgcggcaaaacctcgcaaaatggttt
caaggcacgggcagcgaagggcagcgcgatgccgccgccttggcactgttgcagtctttt
atggtgattaccggcgggccaggaacgggcaaaacgacaacggttgccaaactgctggcg
ctgatttgcggtgaagacgaaaatcttcccaacatcgcgcttgccgcaccgacaggcaaa
gcggcggcacatatggcgcgcgcgctgcaccgtgcaatcaacggttttgacgcgccggag
gccatccgccgccatttgctcaaactggaagggcaaaccgtccaccgactgctgaagctg
cgcccgcccaaaatgcaggcggcgttcaaccctgtttacccgctgccgttggacgtattg
gttatcgatgaagcctccatgttggataccgcattgatgttgcaacttttaaaagcggtc
aaaaccggcgcgcgcgtgattctgctgggggatgaaaaccagctcccgtccgtcggaatc
ggggcggtgctgtccgttttgtcgcacaaaaccgttttggacggagaaacgcaccaaagg
ctggccggcttccttccggaacacggtttcagcgtcagcgcaaatccgcccgtgttggcg
caaaacaccgcccatctgtcgttcagccaccgcttcggcgacaacagtggcatcggctgc
cttgcccgtgccgccgtatcgggcgatgagggggcgtgggcattgtttgaccggtttccg
gacgaactggaacattcggaatgcagtccgaacgctcgagtcgaaaggttgtaccgggcg
cacaaagcctattggcaggcggtaaaagacggcaatatcgaagccgcatacgcaggcatc
tcggatatcgtggtcctggcagcttggcggcaggatgcggaagacttcaacgaagcctat
tgcagccatgtacgccgcaaaatgaacataccggaacatcaggcctatttcgccggagaa
ccgattatgatcagacagaacgactacgcgcttgaactgttcaacggcgacatcggattg
attatggaagatgtcggacggcagggcagccttgccgcctattttgccgatgcggacgga
tttaaaaaggtagcggtaagctgcctgcccgatttcgaacccgcattcgccatgaccgtc
cacaaaagccaaggttcggaatatcgggaagtctggctgctgccgccttccgccgcacct
tcggacgaaggggacgatgcattgtccggattgagtaaggagctgttatataccgccatt
acccgcgcgagggagaagttcgtattcttcggcggagaagaaaccttccggcaagctgcc
gccactgtcaaaacgcgtcagacggcattgggcagtatgctcgagcgggtattttcacaa
gaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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