KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112230527
Entry
112230527         CDS       T05605                                 
Name
(RefSeq) guanine nucleotide exchange factor VAV2-like isoform X1
  KO
K05730  guanine nucleotide exchange factor VAV
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112230527
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    112230527
SSDB
Motif
Pfam: RhoGEF CAMSAP_CH CH SH2 PH SH3_2 C1_1 SH3_9 SH3_1 C1_2 SH2_2 PLU-1 PH_10 CDC24 Nup88
Other DBs
NCBI-GeneID: 112230527
NCBI-ProteinID: XP_042167567
Position
LG33:26624431..26864954
AA seq 895 aa
MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
VQIKGVRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLSPQDMGA
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFIDFKERLLIYGQYCSHMETAQKTLDE
LITTREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPDRQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDVKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHNFQMHTFEKNTNCR
ACKMLLRGIFYQGYYCSRCGTGAHKECLECITICKINPLDTDLGLPSSGPKMVAVRNYHG
TPVPPGKTPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQS
FPSRQPSRETDYYGYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNEE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSKERGPAS
RASTRSPGEPIPAIGASYNFSFLSPQGLNFSSQSSAPFWSGTLSSHFFSSCSSSLFPLAS
HLSSRFTSLFITYSFIAAVIGSHLCRHVSSLCITLFEAYRMCDFIFMCHHCAIIE
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggaggagtggaggcaatgcgggcggtggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcagctgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccagatgttgcacaacctgtcaccggggtctgtggacctaaaggagatc
aacttcagaccccagatgtcccagtttctctgtctgaagaacatccggacgttcctcaag
gtgtgccacgacaagtttggcctgcgtaacagtgagctgtttgacccctttgacctgttc
gatgtcagggatttcgggaaggtgatctcagccctgtccaggatctcccaccacagcatt
gtgcagatcaaaggcgtgaggccttttccttcggaggacactgctctgaatgaggatgac
gtgtaccggagtcttgaggagctggcagatgagcatgacgtgggggaggatgacatctac
gactgtgttccctgtgaggatgatggagatgacatctacgaggacatcatcaaggtggaa
gtacgacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgattcccctgaagcaagttctaagtccacaagacatgggggcc
atctttgtcaatctggaggatgtgattaaggtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaatggtctggggaagatcttcatagacttcaaggaaagg
ttgctgatctacggccagtactgcagccacatggaaaccgctcagaagacactggatgag
ctcatcaccacgcgggaggacgtcaagatgaaagtagaggagtgcactatgaaggtgcag
gaggggaagttcaagctccaggacctgttggtcgtgcccatgcagagagtactaaagtac
cacctcctactcaaggagctggtgagtcattcaactgaccgacctgatagacagcagctg
aaggaggcgttggaggccatgcaggacttggctatgtacatcaatgaagtgaagagagac
aacgagaccttgaagaagattagtgaattccagaactccatcgagaaccttcagcaggtc
aaactggaggagtatggcagaccaaagatagatggagagctcaaggtgtcctccatagtc
aaccgaacaaagcaggaccggtacatattcctgtttgataaagtggtcattgtgtgcaag
cggaaaggctactgctatgaactgaaagagatcattgagctgcagtcgtacaaaatgtct
gacgaccccatgaacaacagggacgtgaagaagtccagtggaaaaatgtggtcctatggc
ttctacctgatccacctgcaaggcaagcagggctttcagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gccacggccaatcagcacaacttccagatgcacacgtttgagaagaacaccaactgccga
gcttgcaagatgctgctgagggggatcttctaccaggggtactactgttcccgctgtggg
actggagctcataaagagtgtctagagtgcatcaccatctgcaaaatcaatccactcgac
acggaccttggactaccgtcatcaggccctaagatggtggcagtaaggaactatcatggg
acgcctgttcctccggggaagactccactctccttccagacaggggacttcatcgagctg
ctgaagggggaacctgacactacctggtgggagggaaagcttatccaaacccagaagagt
ggcttctttcctaacaactgtgtaaagccttgtttggaccccaagcctttgttccagtcc
ttccccagccggcagccctcaagggaaacagactactatggatacccctggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtggaacatacctg
atcagagagaggactgctgaggcagagaggttcgccatcagcatcaagttcaatgaggaa
gtgaagcacattaaagtcattgagaaagacagctggatccacatcactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttc
aagctgctagacacgacattacgatatccctacaaatcgaaagaacgggggccggcgtcg
cgggccagcacccgctctccaggtgagcccatccctgccattggcgcttcctacaacttc
tccttcctcagtcctcagggtctaaacttctcctctcagagctcagcccccttctggtca
ggtactctctcctcccatttcttcagctcttgttcttcttccctcttccctctagcaagc
cacctctcctctcgtttcacatcccttttcatcacgtactctttcatagctgcagtcata
ggttctcatctctgtcgtcatgtgtcatcactgtgcattacattgtttgaagcatatagg
atgtgcgactttatctttatgtgtcatcactgtgccatcattgagtag

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (15)   
   RefSeq(pep) (15)   
DNA sequence (15)   
   RefSeq(nuc) (15)   
Protein domain (15)   
   Pfam (15)   
All databases (53)   

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