KEGG   Plasmodium falciparum HB3: PFHG_01453
Entry
PFHG_01453        CDS       T01052                                 
Name
(Broad) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
pfh  Plasmodium falciparum HB3
Pathway
pfh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PFHG_01453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfh03041]
    PFHG_01453
   03009 Ribosome biogenesis [BR:pfh03009]
    PFHG_01453
Enzymes [BR:pfh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PFHG_01453
Spliceosome [BR:pfh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    PFHG_01453
 Complex B
    PFHG_01453
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    PFHG_01453
Ribosome biogenesis [BR:pfh03009]
 Eukaryotic type
  90S particles
   Helicases
    PFHG_01453
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 Flavi_DEAD nSTAND3 AAA_19 ResIII T2SSE SRP54 ATPase Helicase_RecD AAA_7 AAA_30 Roc TsaE PhoH TniB
AA seq 820 aa
MSEEEDNQSNNISLERNTVSEECTYSTNERTKKKKLDNIIDEENNKKIKLNNNCYEQDDD
EQTLFDNNKINEYNILDNKNVDSNITNNINLNKCNVKVENNILNNITNVQNDILSKENNN
NNNYNNVQPTTHTSVVTNNEDDSMINKLTNQKYSQRYLQLLEEKKKLPAWSAKKNFLKLL
KKNNVLIIVGDTGSGKTTQISQFVLESKYTEKKSIAVTQPRRVAAMSVAARVSEELDVEL
GTYVGYTIRFEDKSSNKTIIKYLTDGMLLRESMSDPLLTKYNTIILDEAHERTLATDILF
GVIKNIQEKRNDLKLIVMSATLDAEKFQKFFNNSKILNIPGRLFPVEIFYTLQAEKDYVK
VVIRTVYDIHINEEEGDILVFLTGEEEIEMTKKEIERVVSRNMNAGQLVVLPLYSSLPPA
QQQKIFEPPPKPRFKGDKNGRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNPRARIE
SLLIAPISKASAEQRAGRAGRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGSVVLNL
KKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDEGDLTNKGHLMSEFPVDPQLAKV
LIESPNYSCSSEILTIAAMLSVPNCFLRPKVKVKEADEMKMRFSHLDGDHLTLLNVFHAY
VKHALVDTNESKKFCFEYFLNHRAMTSAQNVRQQLLRIMERLNLKILSIKPSNPEYYINI
RKALLSGFYQQVAYKTTKGYYITVKDIQMVTLHPSTVFQMNPEWVVYHELLLTSKNFIRT
VTKIEGKWLLEIAPNYYNLEDLPNSEAKNDLKMLHKKLNH
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgagcgaagaggaagataatcaatccaataatatttcgctagaacgaaatactgtatca
gaagaatgtacatatagtacgaatgaacgtaccaaaaaaaaaaaactagataatataata
gatgaggaaaataataagaagataaaattaaataataattgttatgaacaagacgatgac
gaacaaaccttatttgataataataagataaatgaatataatattcttgataataaaaat
gtggattctaatataactaataatataaatctaaataagtgcaatgttaaggtagaaaat
aatattttaaataatattacaaatgtacaaaatgatatattatctaaagaaaataataat
aataataattataataatgttcaacctactactcatacaagtgtcgtcactaataatgag
gacgattcaatgattaacaaattgaccaatcaaaaatatagtcagagatatctacaactt
ttagaagagaaaaaaaagttacccgcatggagtgcaaaaaagaactttttaaaattgctc
aaaaaaaataatgtgctaattatcgttggagatacaggtagtggaaaaacaacacaaata
tctcaattcgttttagaatcaaaatatacggaaaagaaatctatagctgttacacaacca
agaagggtagcagctatgagcgtagctgcacgagtatccgaagaattagatgttgaatta
ggtacttatgttggttataccataagatttgaagataaatctagtaataaaactataata
aaatatttaacagatggtatgttattaagagaatctatgagtgatcctctgttaacaaaa
tataatactataatattagatgaagcacatgaaaggacattagctacagatatattattt
ggcgtcataaaaaatattcaagaaaaaagaaatgatttaaaattaatagtaatgtctgca
acattagatgcagaaaagtttcaaaaattttttaataattcaaaaattttaaatatacca
ggaagattatttcctgtggaaatattttataccttacaagctgaaaaggattatgtaaag
gttgtaattaggacagtatatgatatacatataaatgaagaagaaggagatattttggtt
tttttaacaggtgaagaagaaattgaaatgacgaaaaaagaaattgaaagagttgtttca
agaaatatgaatgctggtcaattggttgtacttcctttatattcatctttaccacctgca
caacagcaaaaaatatttgaaccaccaccaaaacctagatttaaaggtgataaaaatgga
cgaaaatgtatattagcaacaaatattgcagaaacatccataactattgatggtattgtt
tatgtaattgatccaggtttttcaaaacaaaaagtatataatcctagggctcgtatcgag
tccttacttattgcaccaatatctaaagcttctgctgaacaaagagctggaagagctggt
agaactaaaccaggaaaatgttttagattgtatactgaaaaatgttttgaagaaacctta
ccagaacaaacatatccagaaatattaagatcgaatttaggttcagttgtattaaattta
aagaaattagggatcgacgatttagttcattttgattttatggatccccctgctccagaa
acattgatgagagcattagagcaattaaattatttgggagctttagatgacgaaggagat
ttaacaaacaaaggacatttaatgtctgaattccctgtagatcctcagctagcgaaagtg
ttaattgaatccccaaattattcatgttcaagtgaaatattaacaatagctgcaatgtta
tctgttcctaattgttttctaagaccaaaggtaaaggttaaagaagcagatgaaatgaaa
atgagattttcacatttagatggggatcatttaactttacttaatgtatttcatgcatat
gtaaaacatgcacttgttgacacaaatgaatcaaagaaattttgttttgaatatttttta
aatcatagagctatgacatcggctcaaaatgtaagacaacaattattaagaattatggaa
agattaaatttaaaaattctttctattaaaccttcaaaccctgaatattatataaatatt
aggaaagccttattaagtggattttatcaacaagtagcatataaaacaactaaaggatat
tacattactgttaaagatatacaaatggtaaccttacacccatctaccgtttttcaaatg
aatccagaatgggttgtatatcatgaactcttattaactagtaaaaattttataagaact
gtaacaaaaattgagggaaaatggctactagaaatagctccaaattattataacttagaa
gatcttccaaatagtgaagcaaaaaatgacctcaaaatgttgcataaaaaattgaaccat
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (29)   

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