KEGG T05003: 109855472

Pseudomyrmex gracilis (graceful twig ant): 109855472

Entry

109855472         CDS       T05003

Name

(RefSeq) E3 ubiquitin-protein ligase TRIM9

K10649

tripartite motif-containing protein 9/67

Organism

pgc Pseudomyrmex gracilis (graceful twig ant)

Brite

KEGG Orthology (KO) [BR:pgc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgc04131]
    109855472
   04121 Ubiquitin system [BR:pgc04121]
    109855472
Membrane trafficking [BR:pgc04131]
Exocytosis
  Calcium ion-dependent exocytosis
   Others
    109855472
Ubiquitin system [BR:pgc04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    109855472

SSDB

Motif

Pfam:

SPRY zf-B_box fn3 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_3 Apolipoprotein zf-RING_5 zf-C3HC4_2 Gp-FAR-1 TPD52 DUF1664 SIL1 Baculo_PEP_C Exonuc_VII_L

Other DBs

NCBI-GeneID:

109855472

NCBI-ProteinID:

XP_020285341

Position

Unknown

AA seq 719 aa
MEDELRCPSCKELFVEPVLLPCWHALCLACAVNLQAPPDSPPESTADSSNAPGSDQEADK
LSILSETDSGVVCSSTSTSSRPGSYVGTPGNGGFPPSGGTLCLSCPVCQKTVYFDEGGAH
NLPKYRAMQHIVEKYQESRNARLQCQMCEGEPRDATVACEQCEVLYCDACRESCHPKRGP
LAAHNLGPPRGSWQSSGGKGSRPEGTPVCNDHNGEAVTLYCALCKIAICALCLRDRHAAH
PHDVLPLAAACKAQKTELSQNLQQLSERARSTTEFIQRLKGMTDKVHEECAALEEEVEDR
VANLVSLLQARKSRLIEAARQTREARVRSLRDQVTRCATHLQTTTALLTFCIEALKETDS
AAFLQIGGMLSVRAATAAGSWGGAEGVQEIARLPLLDLTLDDKPLRRAIDQLTFVQLKPS
EGEERFPTAAPGAPLLIPEECSAENNSVTVAWQPPPGHGIIGCAGQRGPAIEGYLLELDD
GCGGEFREVYCGRETICTVDGLHFNSLYNARVRAFNSAGEGEYSELIGLQTAEVAWFSWA
TGATGIPQEVSISEDAMSASCEGYEHRVVLSSVGFSRGVHYWELTIDRYHSDTDPAFGIA
RADVSRDQMLGKDDKGWSMYIDRQRSWFMHGGHHAQRTEGGVQQGSTVGVLLDLDTTHTL
RFFVNDQPQGGIAFRDLYGVFYPAVSLNRGVTVTLHTALDVPRHLLALHEEYVSDMIQS

NT seq 2160 nt +upstreamnt +downstreamnt
atggaggacgaactacgatgtcccagttgcaaggagctttttgtcgagccggtattgttg
ccgtgctggcacgcgttgtgtctggcctgcgcggtgaatctgcaagcgccgccggattcg
ccgcccgagtccaccgccgactcgtcgaacgcgcccggatccgatcaggaagccgacaag
ctgtcgattctgtccgagaccgattccggcgtggtctgcagcagcacgtccaccagctcg
cgacccggcagctacgtcggcacgccgggcaacggcggattcccgccgtccggcggcact
ctctgtctctcgtgtcccgtttgccagaagaccgtctacttcgacgagggcggtgcccac
aatttgcccaagtaccgggcgatgcagcacatcgtcgagaaataccaggagtcgcgaaat
gcgcggcttcagtgccagatgtgcgagggagagccgcgcgatgccaccgtcgcgtgcgaa
cagtgcgaggttttatattgcgacgcatgcagagagtcctgtcatccaaagaggggcccg
cttgcggcccacaatctgggaccaccaagaggcagctggcaatcgagcggaggcaaggga
tcccgacccgagggcacgccggtctgtaacgatcacaatggcgaagcggtgaccttgtac
tgcgctctttgcaaaatcgcgatatgcgctctgtgtcttcgcgatcgccacgccgcacat
cctcacgacgttctgccgttggctgccgcttgtaaagcccaaaagacggagctgtcacag
aatctccaacagctgtcggagagggcccgctcgacgacggagttcattcaaaggctcaaa
ggaatgacggataaagtgcacgaggaatgcgcggcgctcgaggaagaggttgaggatcga
gtggcgaatctggtgagccttctgcaggcgaggaagtcgcgactgatcgaggccgctcgg
cagaccagagaggcgcgggtgcgctcgttgcgcgaccaggtgacgagatgcgccacgcat
ctgcagacgaccacggcgctgctcactttctgcatcgaggcgctgaaggagaccgacagc
gcggcctttctgcaaatcggcggcatgctgtcggtccgcgcggccaccgccgccggttcc
tggggcggcgccgagggggtgcaggagatcgctcgtctgcccttgctggatctaactctg
gacgacaagccgttgcgccgcgccatcgatcagctcactttcgtccaactcaaaccgtca
gaaggggaagaacgatttccgacagcagcacccggagcgcctctgctgatccccgaagag
tgcagcgccgagaacaacagcgtcactgttgcctggcagccgccacctggacacggaatt
ataggctgcgccggacagaggggtccggccatcgagggctatctcttggaactggacgat
ggctgcggcggagaattcagagaagtgtactgcggccgcgagactatctgcacggttgac
gggctgcatttcaactcgctctacaacgccagggtgcgggcgttcaacagcgcgggcgag
ggcgagtactcggagctgatcggacttcagacagcggaggtagcgtggttttcgtgggcc
accggtgcgaccggcataccgcaggaagtgtccatatccgaggacgcgatgagcgcgtcc
tgcgagggctacgagcatcgcgtggttctctcgagcgtcggcttttcgcggggcgtgcac
tactgggagctgaccatcgatcgataccatagtgacaccgatccggccttcggtatcgct
cgggccgacgtgtcgcgcgatcagatgctgggtaaggacgacaaaggttggagtatgtac
atcgaccgacagcgatcgtggttcatgcacggcggccatcacgcgcaacggacggagggt
ggcgttcaacagggttcgaccgtcggcgtgctgctcgatctggacaccacgcacacgctg
cgattcttcgtcaacgatcagccgcagggcggtatcgcgttccgcgatctatacggcgtc
ttttatccggcggttagtctgaatcgcggcgtcaccgtgacccttcacaccgctctggac
gtgccgcgtcatctgctcgcgcttcacgaggaatacgtcagcgacatgattcagagctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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