KEGG   Populus trichocarpa (black cottonwood): 7494608
Entry
7494608           CDS       T01077                                 
Name
(RefSeq) ras-related protein RABA1f
  KO
K07904  Ras-related protein Rab-11A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7494608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7494608
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7494608
   04031 GTP-binding proteins [BR:pop04031]
    7494608
Membrane trafficking [BR:pop04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    7494608
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   7494608
  Exosomal proteins of colorectal cancer cells
   7494608
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    7494608
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 Gtr1_RagA ABC_tran AAA_16 AAA_14 TniB FAD-SLDH AAA_21
Other DBs
NCBI-GeneID: 7494608
NCBI-ProteinID: XP_002325590
UniProt: B9IQR9
Position
19:13002536..13004835
AA seq 216 aa
MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
IMLVGNKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSR
KALDVGDDPAALPKGQTITVGKDDVSAVKKVGCCSA
NT seq 651 nt   +upstreamnt  +downstreamnt
atgggtgcttacagggcagatgatgactatgattatctattcaagttagtgttgataggt
gattctggtgttggaaaatccaatcttttatcaagatttacaaggaatgaattcagtttg
gaatccaaatccactattggagttgaatttgccactcgtagtatccatgttgatgataaa
gttgtcaaagctcagatttgggacactgctggccaagaaagataccgtgcaattactagt
gcatattatcgaggagctgttggcgccttgcttgtctatgatgtcactcgacatgtcact
tttgagaatgtggagagatggctaaaggaacttcgtgatcacactgattcaaacattgtg
attatgcttgtgggaaacaaagcagatttgcgtcacttgcgtgcagttactactgaggat
gccactgcatttgctgagagagaaaatacttttttcatggagacctctgccctagagtcc
ttgaatgttgaaaatgctttcactgaagtgctcactcagattcatcgtgtagtcagccgg
aaggctcttgatgttggggatgatcctgcagccttgcccaagggacagactattactgtc
ggcaaagatgatgtatcagctgtgaaaaaggttggatgctgctccgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

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