KEGG   Papaver somniferum (opium poppy): 113310512
Entry
113310512         CDS       T05758                                 
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
Organism
psom  Papaver somniferum (opium poppy)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 AAA_19 Viral_helicase1 DEAD nSTAND3 AAA_22 UvrD-helicase ResIII AAA_16 AAA UvrD_C_2 RuvB_N PIF1 Zot AAA_7 T2SSE AAA_33 AAA_25 ABC_tran IstB_IS21 ATPase SRP54 PhoH RE_TdeIII DUF2786 Mg_chelatase TsaE
Other DBs
NCBI-GeneID: 113310512
NCBI-ProteinID: XP_026414990
Position
9:80194472..80203293
AA seq 644 aa
MEGGKSNASAVSLQQFVSIMTPLIDMEKEAEIAASISSGSSRNLETSQKKGSVLLNLKCV
DVQTGLMGKSLLEFQSTKGDVLPAHKFGNHDVVDLKPNKADTGSPSLGQGVVYRLKDSSI
TVVFDDIPEDGLNSSLRLEKLANEITYRRMKDALIQLSKGVLKGPASDLVPVLFGEKQPT
VAKKDVSFTPFNSNLDHSQKDAITKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSK
ILACAASNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLESALDAQVLRGDNSGLANDIR
KEMKVLNGKLLKAKDKNTKRDIRKELRTLSKEERKRQQLAVTDVIKGADVVLTTLTGSST
WKLESTSFDLVIIDEAAQALEIACWIPLLKGTRCLLAGDHLQLPPTIQSVEAERKGLGRT
LFERLADLYGDDAMRMLTVQYRMHELIMEWSSKELYDSKVKAHSCVASHMLYDLEDVKKT
SSTEPTLLLIDTTGCDMEEKKDEEDSTMNEGEADVAIAHAKRLIESGVRASDIGIITPYA
AQVVLLRMIRNKEDKLKELEISTVDGFQGREKEAIIISMVRSNTKNEVGFLSDRRRMNVA
VTRARRQCCLVCDTETVSSNQFLKRLVEYFEEHGEYLSASEYVG
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggaaggagggaagagcaacgcatctgccgtttctctacaacaatttgtttcgatcatg
actcccttaatcgacatggaaaaggaagctgaaatagcagcttcaatcagttcaggttca
tcgagaaatcttgaaacctctcagaagaaaggatcagtattactcaatctcaagtgtgta
gatgttcagacagggttaatggggaaatcacttctggagtttcaatctactaaaggagat
gttcttcctgctcataagtttgggaatcatgacgttgttgatctaaaacctaacaaagct
gatacgggttccccctcacttggtcagggtgttgtttaccgtctcaaggactcatcaatt
actgtagtgtttgacgacatcccagaagatggcttaaatagttctttacgtcttgagaaa
cttgcaaatgagataacatatcgtaggatgaaggatgctttaatacaactaagcaaaggt
gtgctgaagggacctgcttctgacttagttcctgtattgttcggggagaaacaaccaaca
gtggcaaagaaggatgtttcattcaccccttttaactccaatcttgatcactctcagaaa
gatgctatcacgaaagcactttcttccaagaatgtattcttgctgcatgggcctcctgga
actggaaaaacgacaaccgtggtagaaattatcttacaggaagttaagagaggatcaaag
attcttgcctgtgctgcttctaacatagcagttgataacattgttgagcgacttgttcct
cacagagtaaagttggtgagagtcggccatccagcacgtttgctgcctcaagtactggag
agtgcactagatgcccaagttttgcgaggtgataatagtggtcttgcgaatgatattcgc
aaggaaatgaaggtattaaatgggaagctattaaaagccaaagataaaaatacaaagaga
gacattagaaaagagctcagaactctttcaaaggaggaacgtaagaggcagcaattagca
gtcacagatgtaattaaaggtgctgatgtggtcttgacaactttgactggttcctccact
tggaagcttgagagcacatcttttgatttggtgataattgacgaggctgctcaggcgctt
gaaatagcatgctggataccgctgttgaagggtacaagatgtttactcgcaggagaccat
cttcaacttccaccaaccatacagagtgttgaagctgagaggaaaggtttgggaagaact
ctatttgagcgccttgctgatctgtatggagatgatgcaatgaggatgcttactgttcag
taccgtatgcacgagcttataatggaatggtcatctaaagagctgtatgacagtaaggtc
aaagcccattcatgtgtcgccagtcatatgctatatgatcttgaagatgtaaagaaaaca
tcttcgacagaaccaacccttcttctcatcgacacaactgggtgtgatatggaagagaaa
aaagatgaagaagacagcacaatgaatgagggtgaggctgatgttgctatagcccatgct
aagaggcttattgagagtggagtcagggcatctgatattggaattattaccccttacgct
gcacaggttgtcttgctgaggatgattcggaacaaagaggataaattgaaagagttggaa
atatctacagttgatggcttccaaggtcgggagaaagaagccatcattatttctatggtg
cgatcgaacacaaagaatgaggtaggatttctgagtgaccgaaggagaatgaacgtcgcc
gtgacacgtgcaagaagacagtgttgtcttgtatgtgatacagaaactgtgagtagcaac
cagtttttgaagagattagttgagtactttgaggagcatggggaatatctgagtgcatcc
gaatatgtaggctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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