KEGG   Pseudoalteromonas tetraodonis: PTET_a2197
Entry
PTET_a2197        CDS       T05282                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ptd  Pseudoalteromonas tetraodonis
Pathway
ptd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PTET_a2197 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptd03400]
    PTET_a2197 (uvrB)
DNA repair and recombination proteins [BR:ptd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PTET_a2197 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PTET_a2197 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_22 Kinesin AAA_30 UB2H DUF87 AAA AAA_5 AAA_7
Other DBs
NCBI-ProteinID: ATD03555
Position
I:complement(2114933..2116927)
AA seq 664 aa
MSDHFQLESKFKPAGDQPTAIAQLCEGLEAGLAHQTLLGATGTGKTFTMANIISDLNRPT
IIMAHNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIE
QMRLSATKALLERRDTIIVASVSAIYGLGDPDSYMKMMLLLKVGEKVDQRDMLRRLAELQ
YTRNDIDFSRGTYRVRGEVVDIFPAESDTYAVRVEMFDDEVERLSIFDPLTGAVEKHIVR
ATIYPKTHYVTPREKILEAIEKIKVELKERRAQLLSANKLVEEQRIAQRTQYDIEMMTEL
GYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKEN
LVEYGFRMPSAMDNRPLRFEEFEAIAPQTIYVSATPGDFELERSNGEVAEQVIRPTGLLD
PLIEVRPVGDQVDDLLSEIYKSVEKGERVLVTTLTKRMAEDLTDYLSEHNVKVRYLHSDI
DTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSARSLIQTIG
RAARHLDGRAILYGDRITKSMAKAIDETQRRRDIQHAYNVKHGIEPKALIKKILDVMDVG
EDASPQDNLQLIRKESKKILSAKEIATQIKQLETKMHAYASDLEFEKAASVRDEIHELQQ
QLIN
NT seq 1995 nt   +upstreamnt  +downstreamnt
ttgagcgatcattttcagttagaatcaaaatttaaacccgctggggatcagcctaccgct
atcgctcagttgtgcgaaggtttagaagcagggcttgctcatcaaaccttattgggcgca
acagggacgggaaaaaccttcacgatggctaacatcattagtgatttaaatcgccccact
attattatggcgcacaataaaaccttagcggcgcaattatacggcgagatgaaagaattt
ttcccgcataatgcagttgagtactttgtatcttactacgattactaccaaccagaagcc
tacgtggtagccagcgacacctttattgaaaaagatgcatccatcaatgaacacattgag
caaatgcggctcagcgccactaaagcgctgttagagcgtcgcgataccataatcgttgcg
tcggtatcggcgatttatggtctgggcgatcctgattcatacatgaaaatgatgctgctt
ttaaaagtgggcgaaaaagtcgaccagcgcgatatgctgcgccgccttgcagagctgcaa
tacacccgtaacgatattgattttagtcgtggtacatatcgtgttcgcggcgaagtggtg
gatatatttcccgctgaatcagatacctatgcagtacgtgtagaaatgtttgatgatgaa
gttgaacgcctaagtatttttgaccccctcactggtgctgttgaaaaacatatagtgcgt
gcaactatttaccctaaaactcactatgtaacgccacgagaaaaaatactcgaagccatc
gaaaaaataaaagttgagcttaaagagcgcagggcacaattactcagcgctaataaatta
gttgaagagcaacgtattgcgcagcgtacccaatacgacatagaaatgatgaccgagctt
ggttattgctcaggcattgaaaactacagtcgttacttatcggggcgtacacctggtgat
ccaccgccaacattactcgattatttacccgacgatgcattaatgattattgatgaatcg
cacgtaactgtctcgcaaattggcgctatgtataaaggcgatagaagtcgtaaagaaaac
ctcgttgaatacggttttagaatgccctcggccatggataaccgtccactgcgttttgaa
gaatttgaagccattgcaccgcaaactatttatgtgtcggccacaccgggtgattttgaa
ttagagcgcagcaatggcgaggttgctgaacaagttattcgtccaaccggcttacttgac
ccattaatagaagtgcgcccggttggcgatcaggttgatgacttactctcagaaatttat
aaaagtgttgaaaaaggcgagcgcgtgttagtaacaacactgaccaaacgcatggctgag
gatttaactgattatttaagcgaacataatgtaaaagtacgctatttacactctgacata
gacaccgtagagcgggtcgaaattattcgtgatttacgtgccggtgtgtttgatgtgtta
gtaggcattaacttactacgtgaaggtttagatatgccagaagtggcattagtagctatt
ttagatgccgataaagaaggctttttacgctcagctcgctcgcttattcaaaccataggc
cgtgctgcgcgccaccttgatggtcgtgctattttatacggtgatagaatcactaagtcg
atggccaaagccattgatgaaacccagcgacgccgcgatatacagcatgcttataatgtt
aagcacggtattgagcctaaagcactgatcaaaaagatactcgatgtaatggatgtaggt
gaagatgcttcaccacaagataacttacagcttattcgtaaagagtctaaaaaaattctt
agtgcgaaagaaattgccacgcaaattaagcagcttgaaaccaaaatgcatgcctacgcc
agtgatttagaatttgaaaaagccgcctctgtacgcgatgaaatacatgaactacaacaa
cagttgattaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (21)   

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