KEGG   Rattus norvegicus (rat): 317580Help
Entry
317580            CDS       T01003                                 

Gene name
Rab33a, RGD1563280
Definition
(RefSeq) RAB33A, member RAS oncogene family
  KO
K07919  Ras-related protein Rab-33A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    317580 (Rab33a)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:rno04031]
    317580 (Rab33a)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    317580 (Rab33a)
 Others
  Rab GTPases of specific organelles
   Auto phagosome
    317580 (Rab33a)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    317580 (Rab33a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 SRPRB GTP_EFTU G-alpha TniB PduV-EutP FeoB_N
Motif
Other DBs
NCBI-GeneID: 317580
NCBI-ProteinID: NP_001101727
RGD: 1563280
Ensembl: ENSRNOG00000006698
UniProt: D3ZCU8
Position
Xq36
AA seq 237 aa AA seqDB search
MAQPILGHGSLQPASAAGLASLELDSSMDQYVQIRIFKIIVIGDSNVGKTCLTFRFCGGT
FPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRKSMVEHYYRNVHAVVFVYDVT
KMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNLALKFADAHNMLLFET
SAKDPKESQNVESIFMCLACRLKAQKSLLYRDAERQQGKVQTLEFPQEANSKTSCPC
NT seq 714 nt NT seq  +upstreamnt  +downstreamnt
atggcgcagcccatcctgggccatgggagcctgcagcccgcctcagctgctggcttagca
tccttggagctcgactcatcgatggaccagtacgtgcagattcgcattttcaaaatcatc
gtgattggggactccaacgtgggcaagacctgcctgaccttccgcttctgcgggggtact
ttcccagacaagactgaggccactatcggtgtggacttcagggagaagaccgtggaaatc
gagggcgagaagatcaaggttcaggtgtgggacacggcaggacaagaacgcttccgtaaa
agcatggttgagcattattaccgcaatgtgcatgcagtggtctttgtctatgacgtcacc
aagatgacctccttcaccaacttaaaaatgtggatccaggaatgcaatgggcatgctgtg
cccccgctagtcccaaaggtgcttgtgggtaacaagtgtgacttgagggaacagatccag
gtaccctccaacttagccctgaaatttgctgatgcccacaacatgctcttatttgagaca
tcagccaaggaccccaaagaaagccagaatgtggagtcaatcttcatgtgcctggcttgc
cgactgaaggcccagaaatccctcttgtaccgtgatgctgagaggcagcaaggaaaggtg
cagacactggagttcccacaggaagctaacagtaaaacttcctgtccttgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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