KEGG   Rhincodon typus (whale shark): 109915310
Entry
109915310         CDS       T06055                                 
Name
(RefSeq) ras-related protein Rab-11B
  KO
K07905  Ras-related protein Rab-11B
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109915310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109915310
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109915310
   04031 GTP-binding proteins [BR:rtp04031]
    109915310
Membrane trafficking [BR:rtp04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    109915310
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109915310
  Exosomal proteins of other body fluids (saliva and urine)
   109915310
  Exosomal proteins of colorectal cancer cells
   109915310
GTP-binding proteins [BR:rtp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    109915310
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 AAA_16 PduV-EutP ABC_tran AAA_14 Gtr1_RagA FeoB_N NTPase_1 TniB AAA_24 FAD-SLDH YtzH AAA_21
Other DBs
NCBI-GeneID: 109915310
NCBI-ProteinID: XP_020370507
Position
29:complement(13951573..13973159)
AA seq 218 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
ISDRSAHDESPGNNVVDISVPPTTDGQKSNKLQCCQNM
NT seq 657 nt   +upstreamnt  +downstreamnt
atgggaaccagagatgatgagtatgattatctctttaaagttgtactgattggagactct
ggggttggaaagagcaatctcctatccagatttacacgtaatgaatttaatctggagagt
aagagcaccattggagtggagtttgccaccaggagtatccaggttgatggaaagacaatt
aaggcccagatctgggacacagctggacaggagcgatatcgtgctatcacttcagcgtac
taccgtggggctgtcggtgctctgcttgtttacgatattgccaaacatctaacgtatgag
aacgttgagcggtggctaaaggagttgcgtgaccatgctgataacaatatagtcattatg
ctggttgggaacaagagtgacctccgtcatctgagagcagtaccaactgatgaagcacgg
gcttttgctgaaaagaacaatctatcatttattgaaacatctgcactggattcaacgaat
gtagaagaagcatttaagaacattctgacagaaatttatcgcatagtttcacagaagcag
atttctgatcgatcggctcatgatgaatcacctggtaacaatgtggtagacatcagtgta
cccccaacaactgatgggcagaaatctaataaactgcagtgttgccagaatatgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (30)   

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