KEGG   Saccharomyces cerevisiae (budding yeast): YNL290W
Entry
YNL290W           CDS       T00005                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03030  DNA replication
sce03410  Base excision repair
sce03420  Nucleotide excision repair
sce03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YNL290W (RFC3)
   03410 Base excision repair
    YNL290W (RFC3)
   03420 Nucleotide excision repair
    YNL290W (RFC3)
   03430 Mismatch repair
    YNL290W (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sce03032]
    YNL290W (RFC3)
   03036 Chromosome and associated proteins [BR:sce03036]
    YNL290W (RFC3)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YNL290W (RFC3)
DNA replication proteins [BR:sce03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    YNL290W (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    YNL290W (RFC3)
Chromosome and associated proteins [BR:sce03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    YNL290W (RFC3)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     YNL290W (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    YNL290W (RFC3)
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 AAA_assoc_2 DNA_pol3_delta AAA_14 RuvB_N AAA_22 AAA_16 AAA_11 ResIII DUF815 AAA_24 AAA_7 DEAD AAA_5 AAA_18 AAA_30 bpMoxR Viral_helicase1 AAA_19 AAA_3 AAA_28 nSTAND3 AAA_25 Mg_chelatase DUF6323 ATPase_2 RNA_helicase TIP49 SLFN-g3_helicase IstB_IS21 ABC_tran
Other DBs
NCBI-GeneID: 855426
NCBI-ProteinID: NP_014109
SGD: S000005234
UniProt: P38629
Structure
Position
XIV:86218..87240
AA seq 340 aa
MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT
STIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEAD
AMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIAN
VLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPR
PSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLL
TKLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKANV
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgtcgacaagtacagagaagaggagcaaagaaaaccttccatgggttgaaaaatacaga
cccgaaacgttggacgaagtgtacggacaaaatgaggtgatcaccacagttcgtaaattt
gtagatgaaggtaaattgccacatcttctattctatgggcctccaggtaccggtaaaact
tctacaattgttgctttggcacgtgagatatatggtaagaattactcgaacatggttttg
gagctgaatgcatccgatgacagaggtattgatgtggtgaggaatcaaattaaagacttt
gcctctacaagacaaatcttctctaaagggttcaagttaattatactggatgaagcagat
gccatgaccaatgccgcacaaaatgcgttgagaagagttatagaacggtacaccaagaat
acgcggttctgtgtattggccaattatgcgcataaacttacacctgcgttattgagtagg
tgcacgagattcagatttcagcccttgccccaagaggccattgagcgtcggatagccaac
gtcttggtgcatgagaagctgaagttgtctcctaatgcggagaaggccttaatagaactt
tctaatggggatatgagacgtgtgttaaacgttttgcagtcttgcaaagctactttagac
aatcccgacgaggatgagatcagtgacgacgttatctatgaatgctgtggggcacccaga
ccaagtgacttaaaggcagtattgaagtcgatactggaggacgattggggtaccgcccac
tacacacttaataaggtacgcagtgccaagggtctcgcgttgatcgacctaatcgagggc
atagtgaagatactggaagactacgaacttcaaaatgaggaaacaagagtgcatttgctt
accaaactggccgatatagagtactcgatatccaagggtggcaacgaccagattcagggc
agcgcggtcattggcgccatcaaggccagcttcgagaacgaaactgttaaagccaacgta
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (37)   
   PDB (37)   
Protein domain (34)   
   Pfam (34)   
All databases (126)   

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