KEGG   Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921: CFSAN001921_23905
Entry
CFSAN001921_23905 CDS       T02737                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
setc  Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921
Pathway
setc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:setc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CFSAN001921_23905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:setc03400]
    CFSAN001921_23905
Enzymes [BR:setc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CFSAN001921_23905
DNA repair and recombination proteins [BR:setc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CFSAN001921_23905
SSDB
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 HHH_4 UvrD_C_2 SH3_13 AAA_11 AAA_22 Helicase_RecD PhoH PIF1 AAA_16 UvrD-helicase AAA_14 nSTAND3 Herpes_Helicase AAA SLFN-g3_helicase RsgA_GTPase T2SSE AAA_28 TrwB_AAD_bind NTPase_1 AAA_7 Gloverin
Other DBs
NCBI-ProteinID: AGQ71077
Position
unnamed:complement(32211..33854)
AA seq 547 aa
MTEHKIPASIQQRLLKHHGEESIEAIKQNPYVLIGFGMSFTDVDKLVNFDQFKITVCDHR
RLSAALETAIRKEIEKGHTYTTQACLRPYLTKLLKDKELVTEAFKAGHNKAQYILNPDTG
SYHPTAQLLMENVVAKRLKALANQNNLYDEVANSAYCSSVGELPYELTKKQIEAVTTCLD
NAVSCITGGAGTGKTTVLRTALRAYHQMGFEIHAVALSGRAAMRLHESIGFITSTIAKLL
RREPIEPSSDQPKHLLVIDEASMIDLPTMYRLVNHIHPSVRIIFTGDPDQLPPIGCGKVL
ADIVLSKAIANTMLDIVKRQKGSTGIPEYSKLINQGIVPEKLSTGAIHFHETAKSDIAQA
CCELYQQSPENSRVMAPTKALVAEINKLTQEAVNPSGKRLEFEMHGERFFQNLRLNDAIL
FTQNHYDKGIQNGSLGTLTSIDSSGESYGEVTLDTGDKVEVTQSVLDCMELGYAITLHKA
QGSQFPRIIIALQKGKIVDRAWLYTAITRAEVEIHIVGSSDELRVITEAHSNSHKRNSYL
SELLHQN
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgaccgaacacaagataccagcaagtattcagcagcgcttattgaagcatcatggagaa
gagtccattgaggctattaaacaaaatccgtatgtccttattgggtttggtatgtcgttt
acggatgtcgataaactggttaattttgaccagtttaagatcacagtttgtgatcaccgc
agactaagtgccgcacttgaaaccgcgattcgaaaagagattgagaaaggccacacctat
acaactcaagcgtgtttacgcccatacctaaccaaattactcaaagataaggaactggtg
acggaagcgtttaaagcaggtcacaacaaagcgcaatacatcctaaaccctgacactggc
tcttatcatccaaccgcccagttgttaatggaaaatgtcgttgccaaacgacttaaagca
ctagctaatcaaaacaacctttatgacgaagttgcaaattctgcatattgctcttcggtt
ggtgaattaccatacgagctaaccaagaagcagattgaagcagtgacaacgtgtttggat
aacgccgtgagctgtattacgggcggagctggcacaggtaaaacgacggtacttagaacc
gcacttcgagcctaccatcaaatgggatttgaaatacatgcggtcgcgctgagtggccga
gctgctatgcgcttgcatgagtcaattggctttatcacctcaactatcgctaagttatta
cgtagagagcctattgagccaagttcagaccagccaaagcatttactggtaatagatgaa
gccagtatgattgacttgccaaccatgtatcgcctggtcaaccatattcacccatcggtt
cgtattatctttactggcgaccctgaccagttaccacctatagggtgcggcaaggttttg
gctgatatcgttctatcaaaagccattgctaatactatgctagatatcgttaagcgtcag
aaaggctcaacgggtattcctgaatactccaagctcattaatcaaggtatcgtgcctgaa
aaactaagtacgggggctattcacttccacgaaacggcaaagagcgacattgctcaagcc
tgttgtgagttgtatcagcaatcacctgaaaatagtcgcgtcatggcaccgactaaggca
ctcgttgctgaaattaataaactgacccaagaggctgttaacccaagcggtaaaaggctt
gagtttgaaatgcacggcgagagattctttcaaaacctcagattgaatgatgcgattcta
tttacgcaaaaccactatgataaaggcattcaaaacggatctcttggtacgcttaccagc
attgactcatcaggtgaaagttatggtgaagtaacgctggatacgggggataaagttgag
gtcacacagtccgtgctcgattgcatggagttgggttatgcaataacccttcataaagct
caaggctcgcagtttcctagaatcattattgcactacagaaaggcaaaatcgttgataga
gcgtggctgtataccgcgattaccagagccgaggttgagatccatatagttggtagttcg
gatgaactaagggttattacagaagcccacagtaactcacataagcgaaatagctacttg
agtgaactactacaccaaaattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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