KEGG   Rhizorhabdus wittichii RW1: Swit_0161
Entry
Swit_0161         CDS       T00538                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_0161
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_0161
Enzymes [BR:swi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Swit_0161
Secretion system [BR:swi02044]
 Type IV secretion system
  Trb secretion system protein
   Swit_0161
SSDB
Motif
Pfam: T2SSE AAA_16 FtsK_SpoIIIE GTP_EFTU DEAD AAA_28 AAA_19 TrwB_AAD_bind Zeta_toxin AAA_7 Ligase_CoA nSTAND3 TsaE AAA_29 DUF5729
Other DBs
NCBI-ProteinID: ABQ66532
UniProt: A0A9J9H823
Position
154172..155143
AA seq 323 aa
MTQPSAIVHARSTSMLRSALGPAIAAWLDDNGVAEVMLNADGRLWVDRLDSGMAETGERL
TAAQAERIIRLVAHHVGAEVHRATPRVSAELPESGERFEGLLPPVVAAPVFSIRRPASLP
LALADYVAAGTMTATAAAFLAGAVKDRANILVAGGTSTGKTTLTNALLAVASDSDDRIIL
IEDTRELRCDAANVLALRTAPGVTMTDLVRSSLRLRPDRIPVGEVRGPEALDLLKAWGTG
HPGGIGTIHAGTATSALHRLEQLILEAIAHVPRPLIAETIDVIAVLSGRGTERRLSELVR
VEGLDAAGAYCLRNIHTAQGVTA
NT seq 972 nt   +upstreamnt  +downstreamnt
gtgacccagccctctgccatcgtccatgcgcgcagcacttcgatgctgcgcagcgcgctc
gggccggcgatcgccgcctggctcgacgacaatggcgtcgccgaggtcatgctcaacgcc
gacggccggttgtgggtcgaccggctcgacagcggcatggccgagaccggcgagcgcctg
accgcggcacaggccgagcgcatcatccgccttgtcgcccatcacgtcggggcggaggtc
caccgcgcaacgccccgcgtgtcagccgagctgcccgagagcggcgagcgcttcgaaggc
ctgctgccgcctgtggtcgcggcacccgtcttctcgatccggcggccggcgagtttgccg
ctggcgctcgccgactatgtcgccgccggtaccatgaccgcgacggccgccgccttcctg
gccggggcagtcaaggatcgcgccaatattctcgtcgcgggcggcacatcgaccggcaag
acgacgctcaccaatgcgctgctcgcggtcgcgtccgacagcgacgaccgcatcatcctg
atagaggatacccgcgagctgcgctgcgacgcggctaatgtcctggcgctgcgcactgcg
ccgggggtcacgatgaccgacctggtacgctccagcctgcgcctgcggcccgatcgcatt
ccggtcggcgaagtgcgaggcccggaagcgctcgacctgctcaaagcctggggcaccggc
catcccggcgggatcggtacgattcacgccggcaccgcgacctccgcgctccaccggctc
gaacagctcatcctcgaagccatcgcgcacgtcccgcgccccctgatcgccgagacgatc
gacgtcatcgcggtgctcagcggtcgcggcaccgagcgccgcctgtccgagctggtccgt
gtcgaagggctcgatgcggccggcgcctactgcctccgcaacatccatacagcacaggga
gtcaccgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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