KEGG   Tenacibaculum dicentrarchi: AUW17_03530
Entry
AUW17_03530       CDS       T04208                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
tdi  Tenacibaculum dicentrarchi
Pathway
tdi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AUW17_03530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdi03400]
    AUW17_03530
DNA repair and recombination proteins [BR:tdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AUW17_03530
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AUW17_03530
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_30 AAA_7 DUF2590 EAD4 DUF87 UB2H DUF1192 AAA_16
Other DBs
NCBI-ProteinID: ALU74395
Position
complement(775793..777787)
AA seq 664 aa
MNFELHSNFKPTGDQPTAIKQLVNGLNTNEKHQTLLGVTGSGKTFTVANVVAQVNRPTLV
LAHNKTLAAQLYAEFKQFFPNNAVEYFVSYYDYYQPEAYIPVTGTFIEKDLSINDEIERL
RISTSSSLLSGRRDIIVIASVSCLYGIGNPKEFKKNVIPIKVDQQISRTKFLHKLVTSLY
SRTETEIKSGTFKVKGDVVTIYPSYGDSGYKIHFFGDEIEEIETFNIENNQRIEKLNELT
IYPANLFVTSPDVLQNAIHSIQDDMVKQVDYFKEIGKHLEAKRLLERTEFDLEMIRELGY
CSGIENYSRYLDGRDPGTRPFCLLDYFPDDFLMVIDESHVTIPQTHAMYGGDKSRKVNLV
EYGFRLPAAMDNRPLKFEEFEALQNQVIYVSATPADYELQKTEGVFVEQVIRPTGLLDPI
IEVRPSENQIDNLIEEIQIRVEKDERTLVTTLTKRMAEELAKYLTRIQVRCRYIHSDVDT
LERVQIMQDLRRGLFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSITQTVGRA
ARNVNGRAILYADKITNSMKRTIDETNYRRKKQQDYNTKNGITPTQINKKLDNTLSQDTI
TSFHYDNAIDNVAKQDLQFLSKEEIEKRIRNKRKEMEAAAKNLDFMLAAKLRDEIAVLRK
NLES
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgaattttgaattacactccaactttaagccaactggcgatcagccaaccgctataaaa
caattagtaaacggattaaataccaacgaaaaacaccaaacacttttaggtgttaccggt
tctggtaaaacctttaccgtggcaaatgttgttgctcaggtaaaccgtcctaccttggtt
ttggcacataataaaacattggcggcgcaattatatgccgaattcaagcagttttttcct
aacaatgccgttgaatattttgtttcttactatgattattatcagcccgaagcctatatt
cctgttaccggaacttttatcgaaaaagatttatctattaatgatgaaatagaacgccta
cgaattagcacctcttcatccctactttctgggcgtagagatattattgttattgcctcg
gtttcttgtttatacggaattggaaatccgaaggaatttaaaaaaaatgtaattcctata
aaagtcgatcaacaaatttcacgcaccaaatttttacacaaactagttaccagcttatat
tctcgcaccgaaaccgaaataaaaagtggaacttttaaagtaaaaggcgatgtggtaact
atttacccatcttatggcgatagcgggtataaaattcatttttttggcgatgaaattgaa
gaaattgaaacttttaatattgaaaataaccagcgtattgaaaagttaaacgaactcact
atttaccctgcaaatttgtttgtaacctctcctgatgttttgcaaaatgccattcacagc
atacaagatgatatggtaaaacaagtcgattattttaaagaaatcggcaaacatttagaa
gcaaaacgcttactagaacgcaccgaattcgatttagaaatgattcgtgaattaggctat
tgttcaggaattgaaaattattctcgatatttagacgggcgtgatcctggcacccgcccc
ttttgtttgttagactattttcctgacgattttttaatggttatcgatgaaagccacgtt
accattccacaaactcacgccatgtacggtggcgataaaagcagaaaagtaaacttagta
gaatacggttttcgcttgcctgcggcgatggataatcgtccgttaaaatttgaggaattt
gaagcattacaaaaccaagtaatttatgtatcggcaacgcctgccgattatgaattacaa
aaaaccgaaggcgtatttgtagagcaagtaatccgcccaacggggttattagacccaata
attgaagtgcgccctagtgaaaatcaaattgataatttaattgaagaaattcaaattcgt
gtagaaaaagacgaacgaaccttggtaaccactttaaccaaaagaatggcggaagaattg
gcaaaatatttaaccagaattcaagttcgttgccgttatattcattcagatgtagatact
ttagagcgtgttcaaataatgcaagatttacgaagaggtttgtttgatgttttaattggt
gtcaatttattgcgagaaggtttggatttacccgaagtatcgttagttgctattttagat
gccgataaagaaggttttttacgcagtcatcgctcaattacccaaaccgttggtagagcc
gcaagaaatgtaaacggacgtgctattttatatgctgataaaataaccaatagcatgaaa
cgcactatagatgaaaccaattataggcgtaaaaaacagcaagattacaatactaaaaat
ggtattacgccaacacaaatcaacaaaaaactagacaacacactttctcaagatactatt
acttcttttcattatgataatgcgattgataacgttgcaaaacaagatttgcaattttta
tctaaagaagaaatagaaaaacgcatccgaaataaacgaaaagagatggaagctgctgca
aaaaatttagattttatgctagccgcaaaattgcgtgacgaaattgctgttttaagaaaa
aatttggaatcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (81)   

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